Ascophyllum nodosum
(Male)
Good quality assembly
Description
- Genus: Ascophyllum
- Species: nodosum
- Strain: Unknown strain
- Sex: Male
- Ploidy: Diploid
- Common name: Feamainn bhuí, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina, Nanopore
- Size: 1.25 Gbp
- Number of contigs: 16273
- GC content: 48.3%
- N content: 0%
- N50: 230.39 Kbp
- L50: 1296
Annotation
- Protein-coding genes: 24121
- Gene length (average): 10376.08
- Gene length (median): 4325.0
- CDS length (average): 1187.12
- CDS length (median): 684.0
- CDS proportion (genome): 0.023%
- Genes without introns: 5672
- Number of contigs with at least one gene (genome): 33.0%
- Number of contigs with at least one gene (bases): 77.2%
BUSCO results
Genome
- Single-copy genes: 224
- Duplicated genes: 8
- Fragmented genes: 9
- Missing genes: 62
Proteins
- Single-copy genes: 258
- Duplicated genes: 10
- Fragmented genes: 17
- Missing genes: 18