Differential expression
This page summarises a number of differential transcriptomic experiments that have been carried out
as part of the Phaeoexplorer project.
The experiments analysed several different parameters: life
cycle generation, sex, vegetative versus fertile individuals, freshwater
compared to seawater culture and monoicous versus dioicous species.
In almost all cases the experiments involved triplicate samples of each condition.
For each species, all the RNA-seq data was mapped to the same
reference genome and read counts generated
using Salmon (version 1.3.0).
Hover over icons to view corresponding captions (
)
Sea / Fresh Water
Species |
Genes quantification |
Reproductive / Vegetative
Species |
Genes quantification |
Male / Female
Species |
Genes quantification |
Gametophyte / Sporophyte
Species |
Genes quantification |
Monoicous / Dioicous
Family |
Species |
Genes quantification |