Best Assembly Fucus distichus

Draft genome

Description


  • Genus: Fucus
  • Species: distichus
  • Strain: Unknown strain
  • Sex: Monoicous
  • Ploidy: Diploid
  • Common name: No common name known

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Illumina
  • Size: 724.73 Mbp
  • Number of contigs: 228768
  • GC content: 47.9%
  • N content: 0%
  • N50: 5.61 Kbp
  • L50: 35389

Annotation

  • Protein-coding genes: 19428
  • Gene length (average): 2429.22
  • Gene length (median): 1286.0
  • CDS length (average): 731.54
  • CDS length (median): 483.0
  • CDS proportion (genome): 0.02%
  • Genes without introns: 6362
  • Number of contigs with at least one gene (genome): 7.4%
  • Number of contigs with at least one gene (bases): 16.2%

BUSCO results

Genome

  • Single-copy genes: 110
  • Duplicated genes: 2
  • Fragmented genes: 85
  • Missing genes: 106

Proteins

  • Single-copy genes: 144
  • Duplicated genes: 5
  • Fragmented genes: 109
  • Missing genes: 45
< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >