Pleurocladia lacustris
Good quality assembly
Description
- Genus: Pleurocladia
- Species: lacustris
- Strain: SAG 25.93
- Sex: Unknown
- Ploidy: Haploid
- Common name: No common name known
Resources
Assembly
- Sequencing: Illumina, Nanopore
- Size: 210.22 Mbp
- Number of contigs: 2680
- GC content: 52.1%
- N content: 0%
- N50: 116.13 Kbp
- L50: 555
Annotation
- Protein-coding genes: 16268
- Gene length (average): 8091.05
- Gene length (median): 5995.0
- CDS length (average): 1139.9
- CDS length (median): 885.0
- CDS proportion (genome): 0.056%
- Genes without introns: 2726
- Number of contigs with at least one gene (genome): 76.1%
- Number of contigs with at least one gene (bases): 64.7%
BUSCO results
Genome
- Single-copy genes: 204
- Duplicated genes: 4
- Fragmented genes: 27
- Missing genes: 68
Proteins
- Single-copy genes: 216
- Duplicated genes: 8
- Fragmented genes: 52
- Missing genes: 27