Best Assembly Feldmannia mitchelliae

Draft genome

Description


  • Genus: Feldmannia
  • Species: mitchelliae
  • Strain: KU-2106 Giff mitch BNC GA
  • Sex: Monoicous
  • Ploidy: Haploid
  • Common name: No common name known

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Illumina
  • Size: 205.93 Mbp
  • Number of contigs: 27497
  • GC content: 52.2%
  • N content: 0%
  • N50: 22.36 Kbp
  • L50: 2457

Annotation

  • Protein-coding genes: 17647
  • Gene length (average): 5388.02
  • Gene length (median): 4193.0
  • CDS length (average): 1303.74
  • CDS length (median): 867.0
  • CDS proportion (genome): 0.112%
  • Genes without introns: 3576
  • Number of contigs with at least one gene (genome): 30.8%
  • Number of contigs with at least one gene (bases): 75.6%

BUSCO results

Genome

  • Single-copy genes: 185
  • Duplicated genes: 3
  • Fragmented genes: 48
  • Missing genes: 67

Proteins

  • Single-copy genes: 223
  • Duplicated genes: 10
  • Fragmented genes: 46
  • Missing genes: 24
< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >