Phaeoexplorer genomes

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Good quality assembly

Sequencing: Illumina, Nanopore

Ascophyllum
nodosum
Male

Good quality assembly

Sequencing: Illumina, Nanopore

Chordaria
linearis
Monoicous

Draft genome

Sequencing: Illumina, Nanopore

© D. Scornet CNRS

Choristocarpus
tenellus

Draft genome

Sequencing: Illumina

Chrysoparadoxa
australica

Draft genome

Sequencing: Illumina

Desmarestia
dudresnayi
Monoicous

Good quality assembly

Sequencing: Illumina, Nanopore

Desmarestia
herbacea
Male

Good quality assembly

Sequencing: Illumina, Nanopore

Desmarestia
herbacea
Female

Good quality assembly

Sequencing: Illumina, Nanopore

Dictyota
dichotoma
Male

Draft genome

Sequencing: Illumina

Discosporangium
mesarthrocarpum

Good quality assembly

Sequencing: Illumina, Nanopore

© D. Scornet CNRS

Ectocarpus
crouaniorum
Male

Draft genome

Sequencing: Illumina

Ectocarpus
crouaniorum
Female

Draft genome

Sequencing: Illumina

Ectocarpus
fasciculatus

Draft genome

Sequencing: Illumina

Ectocarpus
fasciculatus

Good quality assembly

Sequencing: Illumina, Nanopore

Ectocarpus
fasciculatus
Male

Draft genome

Sequencing: Illumina

© D. Scornet CNRS

Ectocarpus
fasciculatus
Female

Good quality assembly

Sequencing: Illumina, Nanopore

Ectocarpus
siliculosus
Male

Draft genome

Sequencing: Illumina

© D. Scornet CNRS

Ectocarpus
siliculosus
Female

Draft genome

Sequencing: Illumina

© D. Scornet CNRS

Ectocarpus
species1
Male

Draft genome

Sequencing: Illumina

© D. Scornet CNRS

Ectocarpus
species1
Male

Draft genome

Sequencing: Illumina

© D. Scornet CNRS

Ectocarpus
species1
Female

Draft genome

Sequencing: Illumina

Ectocarpus
species12

Draft genome

Sequencing: Illumina

Ectocarpus
species12
Female

Draft genome

Sequencing: Illumina

Ectocarpus
species13

Draft genome

Sequencing: Illumina

© D. Scornet CNRS

Ectocarpus
species2
Male

Draft genome

Sequencing: Illumina

Ectocarpus
species3
Male

Draft genome

Sequencing: Illumina

Ectocarpus
species3
Female

Draft genome

Sequencing: Illumina

Ectocarpus
species5
Male

Draft genome

Sequencing: Illumina

© D. Scornet CNRS

Ectocarpus
species5
Female

Good quality assembly

Sequencing: Illumina, Nanopore

Ectocarpus
species6

Draft genome

Sequencing: Illumina

Ectocarpus
species8

Draft genome

Sequencing: Illumina

Ectocarpus
species9
Female

Draft genome

Sequencing: Illumina

Feldmannia
mitchelliae
Monoicous

Draft genome

Sequencing: Illumina

Fucus
distichus
Monoicous

Good quality assembly

Sequencing: Illumina, Nanopore

Fucus
serratus
Male

Draft genome

Sequencing: Illumina

Halopteris
paniculata
Monoicous

Draft genome

Sequencing: Illumina

Hapterophycus
canaliculatus
Male

Draft genome

Sequencing: Illumina

Hapterophycus
canaliculatus
Female

Draft genome

Sequencing: Illumina

Heribaudiella
fluviatilis

Good quality assembly

Sequencing: Illumina, Nanopore

Heterosigma
akashiwo

Draft genome

Sequencing: Illumina

Himanthalia
elongata
Dioecious

Draft genome

Sequencing: Illumina, Nanopore

Laminaria
digitata
Male

Draft genome

Sequencing: Illumina

Laminarionema
elsbetiae

Draft genome

Sequencing: Illumina

Macrocystis
pyrifera
Male

Near chromosome scale assembly

Sequencing:

Macrocystis
pyrifera
Female

Draft genome

Sequencing: Illumina

Myriotrichia
clavaeformis
Male

Draft genome

Sequencing: Illumina

Myriotrichia
clavaeformis
Female

Draft genome

Sequencing: Illumina

Pelvetia
canaliculata
Dioecious

Draft genome

Sequencing: Illumina, Nanopore

Phaeothamnion
wetherbeei

Good quality assembly

Sequencing: Illumina, Nanopore

Pleurocladia
lacustris

Near chromosome scale assembly

Sequencing: Illumina, Nanopore

© M. Lorenz, CC BY-SA 4.0

Porterinema
fluviatile

Good quality assembly

Sequencing: Illumina, Nanopore

© D. Scornet CNRS

Pylaiella
littoralis

Good quality assembly

Sequencing: Illumina, PacBio

Saccharina
latissima
Female

Near chromosome scale assembly

Sequencing: Illumina, PacBio, genetic-map-based pseudochromosomes

© Zofia Nehr, CNRS

Saccharina
latissima
Female v2 assembly

Draft genome

Sequencing: Illumina

Saccorhiza
dermatodea
Monoicous

Draft genome

Sequencing: Illumina

© D. Scornet CNRS

Saccorhiza
polyschides
Male

Draft genome

Sequencing: Illumina

Saccorhiza
polyschides
Female

Good quality assembly

Sequencing: Illumina, Nanopore

© Hiroshi Kawai (Kone University)

Schizocladia
ischiensis

Good quality assembly

Sequencing: Illumina, Nanopore

Scytosiphon
promiscuus
Male

Draft genome

Sequencing: Illumina

Scytosiphon
promiscuus
Female

Draft genome

Sequencing: Illumina

Sphacelaria
rigidula
Female

Draft genome

Sequencing: Illumina

Sphaerotrichia
firma
Male

Draft genome

Sequencing: Illumina

Sphaerotrichia
firma
Female

Upcoming Phaeoexplorer genomes

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• Agarum clathratum  
  Sequencing: Illumina
   
  Draft genome
   
• Alaria esculenta  
  Sequencing:
   
  Good quality assembly
   
• Alethocladus corymbosus  
  Sequencing: Illumina
   
  Draft genome
   
• Ascoseira mirabilis  
  Sequencing: Illumina
   
  Draft genome
   
• Bodanella lauterbornii  
  Sequencing: Illumina
   
  Draft genome
   
• Botrytella micromora  
  Sequencing: Illumina
   
  Draft genome
   
• Botrytella uvaeformis  
  Sequencing: Illumina
   
  Draft genome
   
• Canistrocarpus cervicornis  
  Sequencing: Illumina
   
  Draft genome
   
• Carpomitra costata  
  Sequencing: Illumina
   
  Draft genome
   
• Cladosiphon okamuranus  
  Sequencing: Illumina MatePE
   
  Good quality assembly
   
• Desmarestia aculeata  
  Sequencing: Illumina
   
  Draft genome
   
• Desmarestia anceps  
  Sequencing: Illumina
   
  Draft genome
   
• Desmarestia dudresnayi (Monoicous) (v2 assembly)  
  Sequencing:
   
  Near chromosome scale assembly
   
• Desmarestia herbacea (Male) (v2 assembly)  
  Sequencing:
   
  Near chromosome scale assembly
   
• Dictyota dichotoma (Male) (v2 assembly)  
  Sequencing: Illumina, Nanopore, Hi-C
   
  Near chromosome scale assembly
   
• Dictyota falklandica  
  Sequencing: Illumina
   
  Draft genome
   
• Ectocarpoides piscinalis  
  Sequencing: Illumina
   
  Draft genome
   
• Ectocarpus crouaniorum (Male) (v2 assembly)  
  Sequencing: Illumina, Nanopore, Hi-C
   
  Near chromosome scale assembly
   
• Ectocarpus sp.  
  Sequencing: Illumina
   
  Draft genome
   
• Ectocarpus species7 (Male_plus_femaleSDR)  
  Sequencing: Sanger
   
  Near chromosome scale assembly
   
• Ectocarpus subulatus (v3 assembly)  
  Sequencing: Illumina MatePE, Hi-C
   
  Near chromosome scale assembly
   
• Ectocarpus subulatus (Male)  
  Sequencing: Illumina MatePE
   
  Good quality assembly
   
• Elachista antarctica  
  Sequencing: Illumina
   
  Draft genome
   
• Fucus serratus (Male) (v2 assembly)  
  Sequencing: Illumina, PacBio, genetic-map-based pseudochromosomes
   
  Good quality assembly
   
• Himantothallus grandifolius  
  Sequencing: Illumina
   
  Draft genome
   
• Hincksia hincksiae  
  Sequencing: Illumina
   
  Draft genome
   
• Hincksia sandriana  
  Sequencing: Illumina
   
  Draft genome
   
• Laminaria digitata  
  Sequencing: Illumina
   
  Draft genome
   
• Laminariocolax aecidioides  
  Sequencing: Illumina
   
  Draft genome
   
• Laminarionema elsbetiae  
  Sequencing: Illumina
   
  Draft genome
   
• Macrocystis pyrifera  
  Sequencing: Illumina
   
  Draft genome
   
• Microspongium alariae  
  Sequencing: Illumina
   
  Draft genome
   
• Microzonia velutina  
  Sequencing: Illumina
   
  Draft genome
   
• Myriogloea chilensis  
  Sequencing: Illumina
   
  Draft genome
   
• Nereocystis luetkeana  
  Sequencing: PacBio
   
  Near chromosome scale assembly
   
• Padina boergesenii  
  Sequencing: Illumina
   
  Draft genome
   
• Petalonia sp.  
  Sequencing: Illumina
   
  Draft genome
   
• Phaeosaccion multiseriatum  
  Sequencing: Illumina, Nanopore, Hi-C
   
  Near chromosome scale assembly
   
• Polycladia myrica  
  Sequencing: Illumina
   
  Draft genome
   
• Pylaiella littoralis  
  Sequencing: Illumina
   
  Draft genome
   
• Saccharina japonica  
  Sequencing: Illumina MatePE, PacBio
   
  Near chromosome scale assembly
   
• Saccharina latissima  
  Sequencing: Illumina
   
  Draft genome
   
• Sargassum angustifolium  
  Sequencing: Illumina
   
  Draft genome
   
• Sargassum fusiforme  
  Sequencing: Illumina PE, PacBio
   
  Good quality assembly
   
• Sargassum fusiforme  
  Sequencing:
   
  Good quality assembly
   
• Sargassum latifolium  
  Sequencing: Illumina
   
  Draft genome
   
• Sargassum thunbergii  
  Sequencing:
   
  Good quality assembly
   
• Scytosiphon promiscuus  
  Sequencing: Illumina
   
  Draft genome
   
• Scytosiphon promiscuus (Male) (v2 assembly)  
  Sequencing: Illumina, Nanopore, Hi-C
   
  Near chromosome scale assembly
   
• Scytothamnus fasciculatus  
  Sequencing: Illumina
   
  Draft genome
   
• Sphacelaria divaricata  
  Sequencing: Illumina
   
  Draft genome
   
• Sphacelaria rigidula  
  Sequencing: Illumina
   
  Draft genome
   
• Sphacelaria sp.  
  Sequencing: Illumina
   
  Draft genome
   
• Stictyosiphon soriferus  
  Sequencing: Illumina
   
  Draft genome
   
• Stictyosiphon tortilis  
  Sequencing: Illumina
   
  Draft genome
   
• Tribonema minus  
  Sequencing: PacBio + illumina
   
  Good quality assembly
   
• Undaria pinnatifida  
  Sequencing: Illumina, PacBio, genetic-map-based pseudochromosomes
   
  Near chromosome scale assembly
   

Public brown algal genomes analysed in Phaeoexplorer

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