Best Assembly Laminarionema elsbetiae

Draft genome

Description


  • Genus: Laminarionema
  • Species: elsbetiae
  • Strain: ELsaHSoW15
  • Sex: Unknown
  • Ploidy: Haploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 226.78 Mbp
  • Number of contigs: 37108
  • GC content: 52.7%
  • N content: 0%
  • N50: 13.29 Kbp
  • L50: 4881

Annotation

  • Protein-coding genes: 18917
  • Gene length (average): 4077.89
  • Gene length (median): 2585.0
  • CDS length (average): 1044.26
  • CDS length (median): 642.0
  • CDS proportion (genome): 7.7%
  • Genes without introns: 5108
  • Number of contigs with at least one gene (genome): 25.3%
  • Number of contigs with at least one gene (bases): 59.0%

BUSCO results

Genome

  • Single-copy genes: 152
  • Duplicated genes: 0
  • Fragmented genes: 77
  • Missing genes: 74

Proteins

  • Single-copy genes: 158
  • Duplicated genes: 6
  • Fragmented genes: 81
  • Missing genes: 58