Sargassum fusiforme
Description
- Genus: Sargassum
- Species: fusiforme
- Strain: Unknown strain
- Sex: Unknown
- Ploidy: Diploid
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
- Publications:
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina PE, PacBio
- Size: 394.43 Mbp
- Number of contigs: 6749
- GC content: 48.4%
- N content: 0%
- N50: 142.09 Kbp
- L50: 775
Annotation
- Protein-coding genes: 19404
- Gene length (average): 5529.76
- Gene length (median): 3829.0
- CDS length (average): 1358.69
- CDS length (median): 978.0
- CDS proportion (genome): 0.069%
- Genes without introns: 3048
- Number of contigs with at least one gene (genome): 46.0%
- Number of contigs with at least one gene (bases): 80.39%
BUSCO results
Genome
- Single-copy genes: 218
- Duplicated genes: 8
- Fragmented genes: 13
- Missing genes: 64
Proteins
- Single-copy genes: 251
- Duplicated genes: 23
- Fragmented genes: 19
- Missing genes: 10