Preprints
Denoeud, F., Godfroy, O., Cruaud, C., Heesch, S., Nehr, Z., Tadrent, N., Couloux, A., Brillet-Guéguen, L., Delage, L., Mckeown, D., Motomura, T., Sussfeld, D., Fan, X., Mazéas, L., Terrapon, N., Barrera-Redondo, J., Petroll, R., Reynes, L., Choi, S.-W., Jo, J., Uthanumallian, K., Bogaert, K., Duc, C., Ratchinski, P., Lipinska, A., Noel, B., Murphy, A.E., Lohr, M., Khatei, A., Hamon-Giraud, P., Vieira, C., Akerfors, S.S., Akita, S., Avia, K., Badis, Y., Barbeyron, T., Belcour, A., Berrabah, W., Blanquart, S., Bouguerba-Collin, A., Bringloe, T., Cattolico, R.A., Cormier, A., Cruz de Carvalho, H., Dallet, R., De Clerck, O., Debit, A., Denis, E., Destombe, C., Dinatale, E., Dittami, S., Drula, E., Faugeron, S., Got, J., Graf, L., Groisillier, A., Guillemin, M.-L., Harms, L., Hatchett, W.J., Henrissat, B., Hoarau, G., Jollivet, C., Jueterbock, A., Kayal, E., Kogame, K., Le Bars, A., Leblanc, C., Ley, R., Liu, X., Lopez, P.J., Lopez, P., Manirakiza, E., Massau, K., Mauger, S., Mest, L., Michel, G., Monteiro, C., Nagasato, C., Nègre, D., Pelletier, E., Phillips, N., Potin, P., Rensing, S.A., Rousselot, E., Rousvoal, S., Schroeder, D., Scornet, D., Siegel, A., Tirichine, L., Tonon, T., Valentin, K., Verbruggen, H., Weinberger, F., Wheeler, G., Kawai, H., Peters, A.F., Yoon, H.S., Hervé, C., Ye, N., Bapteste, E., Valero, M., Markov, G.V., Corre, E., Coelho, S.M., Wincker, P., Aury, J.-M. and Cock, J.M. (2024). Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems. bioRxiv 2024.02.19.579948.
Barrera-Redondo, J., Lipinska, A.P., Liu, P., Dinatale, E., Cossard, G., Bogaert, K., Hoshino, M., Avia, K., Leiria, G., Avdievich, E., Liesner, D., Luthringer, R., Godfroy, O., Heesch, S., Nehr, Z., Brillet-Guéguen, L., Peters, A.P., Hoarau, G., Pearson, G., Aury, J.-M., Wincker, P., Denoeud, F., Cock, J.M., Haas, F.B. and Coelho, S.M. (2024). Origin and evolutionary trajectories of brown algal sex chromosomes. bioRxiv 2024.01.15.575685
Publications
Akita, S., Vieira, C., Hanyuda, T., Rousseau, F., Cruaud, C., Couloux, A., Heesch, S., Cock, J.M. and Kawai, K. (2022). Providing a phylogenetic framework for trait-based analyses in brown algae: phylogenomic tree inferred from 32 nuclear protein-coding sequences. Molecular Phylogenetics and Evolution, 168, 107408.
Cossard, G.G., Godfroy, O., Nehr, Z., Cruaud, C., Cock, J.M., Lipinska, A. and Coelho, S.M. (2022). Convergent gene expression changes driven by selection underlie transitions to co-sexuality in haploid sexual systems. Nature Ecology and Evolution, 6, 579–589
Mauger, S., Fouqueau, L., Avia, K., Reynes, L., Serrao, E., Neiva, J. and Valero, M. (2021). Development of tools to rapidly identify cryptic species and characterize their genetic diversity in different European kelp species. Journal of Applied Phycology, 33, 4169–4186.
Reynes, L., Thibaut, T., Mauger, S., Blanfuné, A., Holon, F., Cruaud, C., Couloux, C., Valero, M., Aurelle, D. (2020) Genomic signatures of clonality in the deep water kelp Laminaria rodriguezii. Molecular Ecology. 30, 1806–1822. DOI: 10.1111/mec.15860