Publications

Denoeud, F., Godfroy, O., Cruaud, C., Heesch, S., Nehr, Z., Tadrent, N., Couloux, A., Brillet-Guéguen, L., Delage, L., Mckeown, D., Motomura, T., Sussfeld, D., Fan, X., Mazéas, L., Terrapon, N., Barrera-Redondo, J., Petroll, R., Reynes, L., Choi, S.-W., Jo, J., Uthanumallian, K., Bogaert, K., Duc, C., Ratchinski, P., Lipinska, A., Noel, B., Murphy, A.E., Lohr, M., Khatei, A., Hamon-Giraud, P., Vieira, C., Akerfors, S.S., Akita, S., Avia, K., Badis, Y., Barbeyron, T., Belcour, A., Berrabah, W., Blanquart, S., Bouguerba-Collin, A., Bringloe, T., Cattolico, R.A., Cormier, A., Cruz de Carvalho, H., Dallet, R., De Clerck, O., Debit, A., Denis, E., Destombe, C., Dinatale, E., Dittami, S., Drula, E., Faugeron, S., Got, J., Graf, L., Groisillier, A., Guillemin, M.-L., Harms, L., Hatchett, W.J., Henrissat, B., Hoarau, G., Jollivet, C., Jueterbock, A., Kayal, E., Kogame, K., Le Bars, A., Leblanc, C., Ley, R., Liu, X., Lopez, P.J., Lopez, P., Manirakiza, E., Massau, K., Mauger, S., Mest, L., Michel, G., Monteiro, C., Nagasato, C., Nègre, D., Pelletier, E., Phillips, N., Potin, P., Rensing, S.A., Rousselot, E., Rousvoal, S., Schroeder, D., Scornet, D., Siegel, A., Tirichine, L., Tonon, T., Valentin, K., Verbruggen, H., Weinberger, F., Wheeler, G., Kawai, H., Peters, A.F., Yoon, H.S., Hervé, C., Ye, N., Bapteste, E., Valero, M., Markov, G.V., Corre, E., Coelho, S.M., Wincker, P., Aury, J.-M. and Cock, J.M. (2024). Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems. Cell (2024)

Mazéas L., Bouguerba-Collin A., Cock J.M., Denoeud F., Godfroy O., Brillet-Guéguen L., Barbeyron T., Lipinska A.P., Delage L., Corre E., Drula E., Henrissat B., Czjzek M., Terrapon N. and Hervé C. (2024). Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history. BMC Genomics, 25, 950

Akita, S., Vieira, C., Hanyuda, T., Rousseau, F., Cruaud, C., Couloux, A., Heesch, S., Cock, J.M. and Kawai, K. (2022). Providing a phylogenetic framework for trait-based analyses in brown algae: phylogenomic tree inferred from 32 nuclear protein-coding sequences. Molecular Phylogenetics and Evolution, 168, 107408

Cossard, G.G., Godfroy, O., Nehr, Z., Cruaud, C., Cock, J.M., Lipinska, A. and Coelho, S.M. (2022). Convergent gene expression changes driven by selection underlie transitions to co-sexuality in haploid sexual systems. Nature Ecology and Evolution, 6, 579–589

Mauger, S., Fouqueau, L., Avia, K., Reynes, L., Serrao, E., Neiva, J. and Valero, M. (2021). Development of tools to rapidly identify cryptic species and characterize their genetic diversity in different European kelp species. Journal of Applied Phycology, 33, 4169–4186

Reynes, L., Thibaut, T., Mauger, S., Blanfuné, A., Holon, F., Cruaud, C., Couloux, C., Valero, M., Aurelle, D. (2020) Genomic signatures of clonality in the deep water kelp Laminaria rodriguezii. Molecular Ecology. 30, 1806–1822. DOI: 10.1111/mec.15860

Preprints

Barrera-Redondo, J., Lipinska, A.P., Liu, P., Dinatale, E., Cossard, G., Bogaert, K., Hoshino, M., Avia, K., Leiria, G., Avdievich, E., Liesner, D., Luthringer, R., Godfroy, O., Heesch, S., Nehr, Z., Brillet-Guéguen, L., Peters, A.P., Hoarau, G., Pearson, G., Aury, J.-M., Wincker, P., Denoeud, F., Cock, J.M., Haas, F.B. and Coelho, S.M. (2024). Origin and evolutionary trajectories of brown algal sex chromosomes. bioRxiv 2024.01.15.575685