Hapterophycus canaliculatus
(Male)
Draft genome
Description
- Genus: Hapterophycus
- Species: canaliculatus
- Strain: Oshoro7m
- Sex: Male
- Ploidy: Haploid
- Common name: No common name known
Resources
- Genome browser (Not yet available)
- GGA: Galaxy Genome Annotation (Not yet available)
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection ↵
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina
- Size: 184.05 Mbp
- Number of contigs: 74003
- GC content: 54.6%
- N content: 0%
- N50: 3.64 Kbp
- L50: 14755
Annotation
- Protein-coding genes: 25107
- Gene length (average): 1622.46
- Gene length (median): 975.0
- CDS length (average): 571.47
- CDS length (median): 372.0
- CDS proportion (genome): 0.076%
- Genes without introns: 8967
- Number of contigs with at least one gene (genome): 29.3%
- Number of contigs with at least one gene (bases): 42.8%
BUSCO results
Genome
- Single-copy genes: 64
- Duplicated genes: 0
- Fragmented genes: 122
- Missing genes: 117
Proteins
- Single-copy genes: 117
- Duplicated genes: 1
- Fragmented genes: 147
- Missing genes: 38
Additional genome assemblies for this species
-
Hapterophycus canaliculatus Oshoro5f Female
Sequencing: Illumina
Draft genome