You are viewing Hapterophycus canaliculatus Oshoro5f Female , to access additional genome assemblies for this species, click here

Hapterophycus canaliculatus (Female)

Draft genome

AlgaeBase

Worms

GGA

GGA

ncbi

Description


  • Genus: Hapterophycus
  • Species: canaliculatus
  • Strain: Oshoro5f
  • Sex: Female
  • Ploidy: Haploid
  • Common name: No common name known

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Illumina
  • Size: 192.78 Mbp
  • Number of contigs: 26261
  • GC content: 54.7%
  • N content: 0%
  • N50: 16.7 Kbp
  • L50: 3235

Annotation

  • Protein-coding genes: 20036
  • Gene length (average): 4301.83
  • Gene length (median): 3140.0
  • CDS length (average): 1101.6
  • CDS length (median): 717.0
  • CDS proportion (genome): 0.114%
  • Genes without introns: 4898
  • Number of contigs with at least one gene (genome): 38.4%
  • Number of contigs with at least one gene (bases): 74.8%

BUSCO results

Genome

  • Single-copy genes: 186
  • Duplicated genes: 1
  • Fragmented genes: 52
  • Missing genes: 64

Proteins

  • Single-copy genes: 214
  • Duplicated genes: 6
  • Fragmented genes: 57
  • Missing genes: 26

Additional genome assemblies for this species

< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >