Ectocarpus species13
Draft genome
Description
- Genus: Ectocarpus
- Species: species13
- Strain: EcNAP12-S#4-19
- Sex: Unknown
- Ploidy: Diploid
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase (Not yet available)
- WORMS (Not yet available)
- NCBI ↵
- Roscoff Culture Collection ↵
Assembly
- Sequencing: Illumina
- Size: 240.32 Mbp
- Number of contigs: 102324
- GC content: 53.3%
- N content: 0.16%
- N50: 5.38 Kbp
- L50: 11229
Annotation
- Protein-coding genes: 21643
- Gene length (average): 3095.47
- Gene length (median): 1977.0
- CDS length (average): 912.17
- CDS length (median): 567.0
- CDS proportion (genome): 0.077%
- Genes without introns: 5754
- Number of contigs with at least one gene (genome): 15.4%
- Number of contigs with at least one gene (bases): 46.0%
BUSCO results
Genome
- Single-copy genes: 150
- Duplicated genes: 2
- Fragmented genes: 75
- Missing genes: 76
Proteins
- Single-copy genes: 165
- Duplicated genes: 3
- Fragmented genes: 76
- Missing genes: 59