Best Assembly Discosporangium mesarthrocarpum

Draft genome

Description


  • Genus: Discosporangium
  • Species: mesarthrocarpum
  • Strain: MT17-79
  • Sex: Unknown
  • Ploidy: Unknown
  • Common name: No common name known

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Illumina
  • Size: 160.85 Mbp
  • Number of contigs: 28369
  • GC content: 50.3%
  • N content: 0%
  • N50: 12.57 Kbp
  • L50: 3521

Annotation

  • Protein-coding genes: 26708
  • Gene length (average): 2216.87
  • Gene length (median): 1178.0
  • CDS length (average): 730.96
  • CDS length (median): 525.0
  • CDS proportion (genome): 0.119%
  • Genes without introns: 11503
  • Number of contigs with at least one gene (genome): 52.5%
  • Number of contigs with at least one gene (bases): 78.3%

BUSCO results

Genome

  • Single-copy genes: 136
  • Duplicated genes: 8
  • Fragmented genes: 63
  • Missing genes: 96

Proteins

  • Single-copy genes: 165
  • Duplicated genes: 16
  • Fragmented genes: 89
  • Missing genes: 33
< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >