Ectocarpus species8
Draft genome
Description
- Genus: Ectocarpus
- Species: species8
- Strain: EcLAC-412
- Sex: Unknown
- Ploidy: Diploid
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase (Not yet available)
- WORMS (Not yet available)
- NCBI ↵
- Roscoff Culture Collection ↵
Assembly
- Sequencing: Illumina
- Size: 285.76 Mbp
- Number of contigs: 106905
- GC content: 53.4%
- N content: 0.26%
- N50: 5.12 Kbp
- L50: 15651
Annotation
- Protein-coding genes: 31882
- Gene length (average): 2594.66
- Gene length (median): 1585.0
- CDS length (average): 774.98
- CDS length (median): 498.0
- CDS proportion (genome): 0.082%
- Genes without introns: 9141
- Number of contigs with at least one gene (genome): 23.4%
- Number of contigs with at least one gene (bases): 49.9%
BUSCO results
Genome
- Single-copy genes: 99
- Duplicated genes: 24
- Fragmented genes: 94
- Missing genes: 86
Proteins
- Single-copy genes: 146
- Duplicated genes: 29
- Fragmented genes: 107
- Missing genes: 21