Ectocarpus species3
(Female)
Draft genome
Description
- Genus: Ectocarpus
- Species: species3
- Strain: Ec10f (Ec sil Kiel 95-2f)
- Sex: Female
- Ploidy: Haploid
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase (Not yet available)
- WORMS (Not yet available)
- NCBI ↵
- Roscoff Culture Collection ↵
Assembly
- Sequencing: Illumina
- Size: 208.94 Mbp
- Number of contigs: 61809
- GC content: 52.9%
- N content: 0%
- N50: 7.27 Kbp
- L50: 7781
Annotation
- Protein-coding genes: 18004
- Gene length (average): 3876.43
- Gene length (median): 3064.0
- CDS length (average): 1167.22
- CDS length (median): 807.0
- CDS proportion (genome): 0.101%
- Genes without introns: 3598
- Number of contigs with at least one gene (genome): 20.7%
- Number of contigs with at least one gene (bases): 55.1%
BUSCO results
Genome
- Single-copy genes: 143
- Duplicated genes: 3
- Fragmented genes: 59
- Missing genes: 98
Proteins
- Single-copy genes: 185
- Duplicated genes: 8
- Fragmented genes: 66
- Missing genes: 44
Additional genome assemblies for this species
-
Ectocarpus species3 Ec11m (Ec sil Kiel 95-3m) Male
Sequencing: Illumina
Draft genome