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Best Assembly Ectocarpus species3 (Female)

Draft genome

Description


  • Genus: Ectocarpus
  • Species: species3
  • Strain: Ec10f (Ec sil Kiel 95-2f)
  • Sex: Female
  • Ploidy: Haploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 199.26 Mbp
  • Number of contigs: 61809
  • GC content: 52.9%
  • N content: 0%
  • N50: 7.1 Kbp
  • L50: 7781

Annotation

  • Protein-coding genes: 18004
  • Gene length (average): 3876.43
  • Gene length (median): 3064.0
  • CDS length (average): 1167.22
  • CDS length (median): 807.0
  • CDS proportion (genome): 0.101%
  • Genes without introns: 3598
  • Number of contigs with at least one gene (genome): 20.7%
  • Number of contigs with at least one gene (bases): 55.1%

BUSCO results

Genome

  • Single-copy genes: 143
  • Duplicated genes: 3
  • Fragmented genes: 59
  • Missing genes: 98

Proteins

  • Single-copy genes: 185
  • Duplicated genes: 8
  • Fragmented genes: 66
  • Missing genes: 44

Additional genome assemblies for this species