Ectocarpus species3 (Male)
Draft genome
Description
- Genus: Ectocarpus
- Species: species3
- Strain: Ec11m (Ec sil Kiel 95-3m)
- Sex: Male
- Ploidy: Haploid
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase (Not yet available)
- WORMS (Not yet available)
- NCBI ↵
- Roscoff Culture Collection ↵
Assembly
- Sequencing: Illumina
- Size: 225.27 Mbp
- Number of contigs: 73265
- GC content: 53.2%
- N content: 0%
- N50: 7.74 Kbp
- L50: 7651
Annotation
- Protein-coding genes: 18101
- Gene length (average): 3685.07
- Gene length (median): 2553.0
- CDS length (average): 1081.61
- CDS length (median): 678.0
- CDS proportion (genome): 8.6%
- Genes without introns: 4436
- Number of contigs with at least one gene (genome): 16.1%
- Number of contigs with at least one gene (bases): 52.1%
BUSCO results
Genome
- Single-copy genes: 162
- Duplicated genes: 4
- Fragmented genes: 65
- Missing genes: 72
Proteins
- Single-copy genes: 177
- Duplicated genes: 5
- Fragmented genes: 73
- Missing genes: 48
Additional genome assemblies for this species
-
Ectocarpus species3 Ec10f (Ec sil Kiel 95-2f) Female
Best genome assembly for the species
Sequencing: Illumina
Draft genome