You are viewing Ectocarpus species3 Ec11m (Ec sil Kiel 95-3m) Male , to access additional genome assemblies for this species, click here

Ectocarpus species3 (Male)

Draft genome

GGA

GGA

ncbi

Description


  • Genus: Ectocarpus
  • Species: species3
  • Strain: Ec11m (Ec sil Kiel 95-3m)
  • Sex: Male
  • Ploidy: Haploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 214.84 Mbp
  • Number of contigs: 73265
  • GC content: 53.2%
  • N content: 0%
  • N50: 7.55 Kbp
  • L50: 7651

Annotation

  • Protein-coding genes: 18101
  • Gene length (average): 3685.07
  • Gene length (median): 2553.0
  • CDS length (average): 1081.61
  • CDS length (median): 678.0
  • CDS proportion (genome): 8.6%
  • Genes without introns: 4436
  • Number of contigs with at least one gene (genome): 16.1%
  • Number of contigs with at least one gene (bases): 52.1%

BUSCO results

Genome

  • Single-copy genes: 162
  • Duplicated genes: 4
  • Fragmented genes: 65
  • Missing genes: 72

Proteins

  • Single-copy genes: 177
  • Duplicated genes: 5
  • Fragmented genes: 73
  • Missing genes: 48

Additional genome assemblies for this species