Laminaria digitata
(Male)
Draft genome
Description
- Genus: Laminaria
- Species: digitata
- Strain: LdigPH10-18mv
- Sex: Male
- Ploidy: Haploid
- Common name: Oarweed
Resources
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina, Nanopore
- Size: 447.63 Mbp
- Number of contigs: 141688
- GC content: 50.3%
- N content: 0%
- N50: 6.23 Kbp
- L50: 18816
Annotation
- Protein-coding genes: 42270
- Gene length (average): 1692.34
- Gene length (median): 636.0
- CDS length (average): 594.94
- CDS length (median): 423.0
- CDS proportion (genome): 0.055%
- Genes without introns: 27401
- Number of contigs with at least one gene (genome): 21.9%
- Number of contigs with at least one gene (bases): 36.9%
BUSCO results
Genome
- Single-copy genes: 101
- Duplicated genes: 4
- Fragmented genes: 95
- Missing genes: 103
Proteins
- Single-copy genes: 121
- Duplicated genes: 11
- Fragmented genes: 119
- Missing genes: 52