Scytosiphon promiscuus (Female)
Draft genome
Description
- Genus: Scytosiphon
- Species: promiscuus
- Strain: 000310-Muroran-5-female
- Sex: Female
- Ploidy: Haploid
- Common name: No common name known
Resources
- Genome browser (Not yet available)
- GGA: Galaxy Genome Annotation (Not yet available)
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection ↵
Assembly
- Sequencing: Illumina
- Size: 245.01 Mbp
- Number of contigs: 89860
- GC content: 53.7%
- N content: 0%
- N50: 30.41 Kbp
- L50: 1751
Annotation
- Protein-coding genes: 30281
- Gene length (average): 3678.45
- Gene length (median): 1230.0
- CDS length (average): 970.69
- CDS length (median): 591.0
- CDS proportion (genome): 0.113%
- Genes without introns: 13397
- Number of contigs with at least one gene (genome): 16.0%
- Number of contigs with at least one gene (bases): 65.9%
BUSCO results
Genome
- Single-copy genes: 227
- Duplicated genes: 2
- Fragmented genes: 23
- Missing genes: 51
Proteins
- Single-copy genes: 247
- Duplicated genes: 8
- Fragmented genes: 32
- Missing genes: 16
Additional genome assemblies for this species
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Scytosiphon promiscuus 110409 Ot110409-Otamoi-16-male Male
Best genome assembly for the species
Sequencing: Illumina
Draft genome