You are viewing Ectocarpus species1 Ec sil Puy CHCH Z9 G5f Female , to access additional genome assemblies for this species, click here

Ectocarpus species1 (Female)

Draft genome

GGA

GGA

ncbi

Description


  • Genus: Ectocarpus
  • Species: species1
  • Strain: Ec sil Puy CHCH Z9 G5f
  • Sex: Female
  • Ploidy: Haploid
  • Common name: No common name known
© D. Scornet CNRS

Resources

Assembly

  • Sequencing: Illumina
  • Size: 177.72 Mbp
  • Number of contigs: 19405
  • GC content: 52.8%
  • N content: 0%
  • N50: 24.67 Kbp
  • L50: 2096

Annotation

  • Protein-coding genes: 19066
  • Gene length (average): 4892.49
  • Gene length (median): 3706.0
  • CDS length (average): 1256.42
  • CDS length (median): 834.0
  • CDS proportion (genome): 10.3%
  • Genes without introns: 3883
  • Number of contigs with at least one gene (genome): 16.8%
  • Number of contigs with at least one gene (bases): 66.4%

BUSCO results

Genome

  • Single-copy genes: 202
  • Duplicated genes: 2
  • Fragmented genes: 38
  • Missing genes: 61

Proteins

  • Single-copy genes: 222
  • Duplicated genes: 5
  • Fragmented genes: 38
  • Missing genes: 38

Additional genome assemblies for this species