Ectocarpus species2
(Male)
Draft genome
Description
- Genus: Ectocarpus
- Species: species2
- Strain: Ec06m (Ec sil Vic88 12-11m)
- Sex: Male
- Ploidy: Haploid
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase (Not yet available)
- WORMS (Not yet available)
- NCBI ↵
- Roscoff Culture Collection ↵
Assembly
- Sequencing: Illumina
- Size: 183.42 Mbp
- Number of contigs: 32144
- GC content: 53.3%
- N content: 0%
- N50: 12.58 Kbp
- L50: 4087
Annotation
- Protein-coding genes: 16843
- Gene length (average): 4246.32
- Gene length (median): 3309.0
- CDS length (average): 1144.23
- CDS length (median): 786.0
- CDS proportion (genome): 9.6%
- Genes without introns: 3278
- Number of contigs with at least one gene (genome): 25.8%
- Number of contigs with at least one gene (bases): 62.5%
BUSCO results
Genome
- Single-copy genes: 172
- Duplicated genes: 9
- Fragmented genes: 50
- Missing genes: 72
Proteins
- Single-copy genes: 194
- Duplicated genes: 5
- Fragmented genes: 65
- Missing genes: 39