Pylaiella littoralis
Good quality assembly
Description
- Genus: Pylaiella
- Species: littoralis
- Strain: U1.48
- Sex: Unknown
- Ploidy: Haploid
- Common name: Mung
Resources
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina, Nanopore
- Size: 322.46 Mbp
- Number of contigs: 1708
- GC content: 51.4%
- N content: 0%
- N50: 352.95 Kbp
- L50: 274
Annotation
- Protein-coding genes: 22501
- Gene length (average): 8153.52
- Gene length (median): 4525.0
- CDS length (average): 1309.47
- CDS length (median): 798.0
- CDS proportion (genome): 0.091%
- Genes without introns: 5559
- Number of contigs with at least one gene (genome): 89.1%
- Number of contigs with at least one gene (bases): 99.2%
BUSCO results
Genome
- Single-copy genes: 218
- Duplicated genes: 4
- Fragmented genes: 17
- Missing genes: 64
Proteins
- Single-copy genes: 276
- Duplicated genes: 3
- Fragmented genes: 9
- Missing genes: 15