Cladosiphon okamuranus
Description
- Genus: Cladosiphon
- Species: okamuranus
- Strain: S-Strain
- Sex: Unknown
- Ploidy: Diploid
- Common name: mozuku
Resources
- Genome browser (Not yet available)
- GGA: Galaxy Genome Annotation (Not yet available)
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
- Publications:
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina MatePE
- Size: 129.92 Mbp
- Number of contigs: 541
- GC content: 54.3%
- N content: Undetermined
- N50: 416.06 Kbp
- L50: 91
Annotation
- Protein-coding genes: 13640
- Gene length (average): 7433.38
- Gene length (median): 5816.5
- CDS length (average): 1993.22
- CDS length (median): 1388.0
- CDS proportion (genome): 0.232%
- Genes without introns: 265
- Number of contigs with at least one gene (genome): 94.82%
- Number of contigs with at least one gene (bases): 99.8%
BUSCO results
Genome
- Single-copy genes: 240
- Duplicated genes: 2
- Fragmented genes: 8
- Missing genes: 53
Proteins
- Single-copy genes: 222
- Duplicated genes: 23
- Fragmented genes: 35
- Missing genes: 23