Best Assembly Fucus serratus (Male)

Good quality assembly

Description


  • Genus: Fucus
  • Species: serratus
  • Strain: Unknown strain
  • Sex: Male
  • Ploidy: Diploid
  • Common name: Toothed wrack or serrated wrack

Resources

Assembly

  • Sequencing: Illumina, Nanopore
  • Size: 1.15 Gbp
  • Number of contigs: 8882
  • GC content: 48.3%
  • N content: 0%
  • N50: 282.2 Kbp
  • L50: 1186

Annotation

  • Protein-coding genes: 21263
  • Gene length (average): 11233.12
  • Gene length (median): 6298.0
  • CDS length (average): 1202.77
  • CDS length (median): 837.0
  • CDS proportion (genome): 0.021%
  • Genes without introns: 3795
  • Number of contigs with at least one gene (genome): 49.8%
  • Number of contigs with at least one gene (bases): 79.6%

BUSCO results

Genome

  • Single-copy genes: 221
  • Duplicated genes: 16
  • Fragmented genes: 10
  • Missing genes: 66

Proteins

  • Single-copy genes: 257
  • Duplicated genes: 16
  • Fragmented genes: 15
  • Missing genes: 15