Fucus serratus (Male)
Good quality assembly
Description
- Genus: Fucus
- Species: serratus
- Strain: Unknown strain
- Sex: Male
- Ploidy: Diploid
- Common name: Toothed wrack or serrated wrack
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
- Publications:
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina, Nanopore
- Size: 1.23 Gbp
- Number of contigs: 8882
- GC content: 48.3%
- N content: 0%
- N50: 288.97 Kbp
- L50: 1186
Annotation
- Protein-coding genes: 21263
- Gene length (average): 11233.12
- Gene length (median): 6298.0
- CDS length (average): 1202.77
- CDS length (median): 837.0
- CDS proportion (genome): 2.1%
- Genes without introns: 3795
- Number of contigs with at least one gene (genome): 49.8%
- Number of contigs with at least one gene (bases): 79.6%
BUSCO results (BUSCO v5 with eukaryota_odb10)
Genome
- Single-copy genes: 180
- Duplicated genes: 21
- Fragmented genes: 23
- Missing genes: 31
Proteins
- Single-copy genes: 206
- Duplicated genes: 10
- Fragmented genes: 22
- Missing genes: 17
Additional genome assemblies for this species
-
Fucus serratus Male (v2 assembly)
Sequencing: Illumina, Nanopore
Good quality assembly