Fucus serratus (Male) (v2 assembly)
Good quality assembly
Description
- Genus: Fucus
- Species: serratus
- Strain: Unknown strain
- Sex: Male
- Ploidy: Diploid
- Common name: No common name known
Resources
-
Download Fucus serratus archive (Not yet available)
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
- Publications:
World occurrences (from GBIF)
Assembly
- Version: v2
- Sequencing: Illumina, PacBio, genetic-map-based pseudochromosomes
- Size: 1.09 Gbp
- Number of contigs: 3805
- GC content: 48.3%
- N content: 0%
- N50: 17.86 Mbp
- L50: 24
Annotation
- Protein-coding genes: 21263
- Gene length (average): 11233.12
- Gene length (median): 6298.0
- CDS length (average): 1202.77
- CDS length (median): 837.0
- CDS proportion (genome): 2.1%
- Genes without introns: 3795
- Number of contigs with at least one gene (genome): 49.8%
- Number of contigs with at least one gene (bases): 79.6%
BUSCO results (BUSCO v5 with eukaryota_odb10)
Genome
- Single-copy genes: 190
- Duplicated genes: 9
- Fragmented genes: 25
- Missing genes: 31
Proteins
- Single-copy genes: 206
- Duplicated genes: 10
- Fragmented genes: 22
- Missing genes: 17
Additional genome assemblies for this species
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Sequencing: Illumina, PacBio, genetic-map-based pseudochromosomes
Good quality assembly