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Best Assembly Ectocarpus species5 (Female)

Draft genome

Description


  • Genus: Ectocarpus
  • Species: species5
  • Strain: Ec13f (Ec sil Jap16 a-8 f)
  • Sex: Female
  • Ploidy: Haploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 168.6 Mbp
  • Number of contigs: 28565
  • GC content: 53.7%
  • N content: 0%
  • N50: 15.96 Kbp
  • L50: 2994

Annotation

  • Protein-coding genes: 17193
  • Gene length (average): 4661.8
  • Gene length (median): 3639.0
  • CDS length (average): 1257.15
  • CDS length (median): 873.0
  • CDS proportion (genome): 12.1%
  • Genes without introns: 2972
  • Number of contigs with at least one gene (genome): 31.4%
  • Number of contigs with at least one gene (bases): 73.7%

BUSCO results

Genome

  • Single-copy genes: 195
  • Duplicated genes: 0
  • Fragmented genes: 46
  • Missing genes: 62

Proteins

  • Single-copy genes: 218
  • Duplicated genes: 4
  • Fragmented genes: 49
  • Missing genes: 32

Additional genome assemblies for this species