You are viewing Ectocarpus species5 Ec12m (Ec sil Jap16 a-1 m) Male , to access additional genome assemblies for this species, click here

Ectocarpus species5 (Male)

Draft genome

GGA

GGA

ncbi

Description


  • Genus: Ectocarpus
  • Species: species5
  • Strain: Ec12m (Ec sil Jap16 a-1 m)
  • Sex: Male
  • Ploidy: Haploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 152.47 Mbp
  • Number of contigs: 45536
  • GC content: 53.7%
  • N content: 0%
  • N50: 5.4 Kbp
  • L50: 8318

Annotation

  • Protein-coding genes: 20082
  • Gene length (average): 2579.36
  • Gene length (median): 1735.0
  • CDS length (average): 818.83
  • CDS length (median): 531.0
  • CDS proportion (genome): 0.102%
  • Genes without introns: 5505
  • Number of contigs with at least one gene (genome): 34.2%
  • Number of contigs with at least one gene (bases): 56.9%

BUSCO results

Genome

  • Single-copy genes: 114
  • Duplicated genes: 1
  • Fragmented genes: 106
  • Missing genes: 82

Proteins

  • Single-copy genes: 136
  • Duplicated genes: 3
  • Fragmented genes: 101
  • Missing genes: 63

Additional genome assemblies for this species