Ectocarpus species9
(Female)
Draft genome
Description
- Genus: Ectocarpus
- Species: species9
- Strain: EcSCA-722f
- Sex: Female
- Ploidy: Haploid
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase (Not yet available)
- WORMS (Not yet available)
- NCBI ↵
- Roscoff Culture Collection ↵
Assembly
- Sequencing: Illumina
- Size: 171.85 Mbp
- Number of contigs: 34031
- GC content: 53.7%
- N content: 0%
- N50: 13.51 Kbp
- L50: 3603
Annotation
- Protein-coding genes: 18057
- Gene length (average): 4219.45
- Gene length (median): 3173.0
- CDS length (average): 1163.15
- CDS length (median): 762.0
- CDS proportion (genome): 9.8%
- Genes without introns: 3523
- Number of contigs with at least one gene (genome): 21.5%
- Number of contigs with at least one gene (bases): 59.9%
BUSCO results
Genome
- Single-copy genes: 170
- Duplicated genes: 2
- Fragmented genes: 65
- Missing genes: 66
Proteins
- Single-copy genes: 195
- Duplicated genes: 5
- Fragmented genes: 53
- Missing genes: 50