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Ectocarpus fasciculatus (Female)

Draft genome

AlgaeBase

Worms

GGA

GGA

ncbi

Description


  • Genus: Ectocarpus
  • Species: fasciculatus
  • Strain: Ec846f (Ec191 B4 f)
  • Sex: Female
  • Ploidy: Haploid
  • Common name: No common name known
© D. Scornet CNRS

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Illumina
  • Size: 165.86 Mbp
  • Number of contigs: 35116
  • GC content: 53.6%
  • N content: 0%
  • N50: 9.06 Kbp
  • L50: 5030

Annotation

  • Protein-coding genes: 18167
  • Gene length (average): 3600.46
  • Gene length (median): 2670.0
  • CDS length (average): 1042.37
  • CDS length (median): 693.0
  • CDS proportion (genome): 0.113%
  • Genes without introns: 3757
  • Number of contigs with at least one gene (genome): 33.0%
  • Number of contigs with at least one gene (bases): 65.0%

BUSCO results

Genome

  • Single-copy genes: 142
  • Duplicated genes: 1
  • Fragmented genes: 86
  • Missing genes: 74

Proteins

  • Single-copy genes: 163
  • Duplicated genes: 2
  • Fragmented genes: 91
  • Missing genes: 47

Additional genome assemblies for this species

< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >