You are viewing Ectocarpus fasciculatus EfasUO1 , to access additional genome assemblies for this species, click here

Ectocarpus fasciculatus

Draft genome

ncbi

Description


  • Genus: Ectocarpus
  • Species: fasciculatus
  • Strain: EfasUO1
  • Sex: Unknown
  • Ploidy: Diploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 221.67 Mbp
  • Number of contigs: 46543
  • GC content: 52.8%
  • N content: 0%
  • N50: 11.84 Kbp
  • L50: 4574

Annotation

  • Protein-coding genes: 22946
  • Gene length (average): 3414.1
  • Gene length (median): 2244.0
  • CDS length (average): 1164.55
  • CDS length (median): 831.0
  • CDS proportion (genome): 11.2%
  • Genes without introns: 5577
  • Number of contigs with at least one gene (genome): 23.8%
  • Number of contigs with at least one gene (bases): 65.6%

BUSCO results

Genome

  • Single-copy genes: 221
  • Duplicated genes: 38
  • Fragmented genes: 15
  • Missing genes: 29

Proteins

  • Single-copy genes: 184
  • Duplicated genes: 77
  • Fragmented genes: 24
  • Missing genes: 18

Additional genome assemblies for this species