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Ectocarpus fasciculatus

Draft genome

Description


  • Genus: Ectocarpus
  • Species: fasciculatus
  • Strain: EfasUO2
  • Sex: Unknown
  • Ploidy: Diploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 187.26 Mbp
  • Number of contigs: 42570
  • GC content: 53.4%
  • N content: 0%
  • N50: 10.17 Kbp
  • L50: 4979

Annotation

  • Protein-coding genes: 17977
  • Gene length (average): 3833.34
  • Gene length (median): 2883.0
  • CDS length (average): 1107.21
  • CDS length (median): 741.0
  • CDS proportion (genome): 9.4%
  • Genes without introns: 3378
  • Number of contigs with at least one gene (genome): 23.8%
  • Number of contigs with at least one gene (bases): 58.6%

BUSCO results

Genome

  • Single-copy genes: 173
  • Duplicated genes: 3
  • Fragmented genes: 67
  • Missing genes: 60

Proteins

  • Single-copy genes: 189
  • Duplicated genes: 6
  • Fragmented genes: 72
  • Missing genes: 36

Additional genome assemblies for this species