Ectocarpus fasciculatus
(Male)
Description
- Genus: Ectocarpus
- Species: fasciculatus
- Strain: Ec847m (Ec191 A9 m)
- Sex: Male
- Ploidy: Haploid
- Common name: No common name known
Resources
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina, Nanopore
- Size: 227.56 Mbp
- Number of contigs: 781
- GC content: 53.4%
- N content: 0%
- N50: 671.11 Kbp
- L50: 94
Annotation
- Protein-coding genes: 19173
- Gene length (average): 7391.34
- Gene length (median): 5509.0
- CDS length (average): 1220.93
- CDS length (median): 972.0
- CDS proportion (genome): 0.103%
- Genes without introns: 2822
- Number of contigs with at least one gene (genome): 91.1%
- Number of contigs with at least one gene (bases): 98.6%
BUSCO results
Genome
- Single-copy genes: 231
- Duplicated genes: 2
- Fragmented genes: 17
- Missing genes: 53
Proteins
- Single-copy genes: 234
- Duplicated genes: 7
- Fragmented genes: 39
- Missing genes: 23
Additional genome assemblies for this species
-
Ectocarpus fasciculatus Ec846f (Ec191 B4 f) Female
Sequencing: Illumina, Nanopore
Good quality assembly -
Ectocarpus fasciculatus EfasUO1
Sequencing: Illumina, Nanopore
Good quality assembly -
Ectocarpus fasciculatus EfasUO2
Sequencing: Illumina, Nanopore
Good quality assembly