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Best Assembly Ectocarpus fasciculatus (Male)

Good quality assembly

Description


  • Genus: Ectocarpus
  • Species: fasciculatus
  • Strain: Ec847m (Ec191 A9 m)
  • Sex: Male
  • Ploidy: Haploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina, Nanopore
  • Size: 217.02 Mbp
  • Number of contigs: 781
  • GC content: 53.4%
  • N content: 0%
  • N50: 655.38 Kbp
  • L50: 94

Annotation

  • Protein-coding genes: 19173
  • Gene length (average): 7391.34
  • Gene length (median): 5509.0
  • CDS length (average): 1220.93
  • CDS length (median): 972.0
  • CDS proportion (genome): 0.103%
  • Genes without introns: 2822
  • Number of contigs with at least one gene (genome): 91.1%
  • Number of contigs with at least one gene (bases): 98.6%

BUSCO results

Genome

  • Single-copy genes: 231
  • Duplicated genes: 2
  • Fragmented genes: 17
  • Missing genes: 53

Proteins

  • Single-copy genes: 234
  • Duplicated genes: 7
  • Fragmented genes: 39
  • Missing genes: 23

Additional genome assemblies for this species