You are viewing Ectocarpus species12 Ec fas CH92 Nie 2f Female , to access additional genome assemblies for this species, click here

Ectocarpus species12 (Female)

Draft genome

GGA

GGA

ncbi

Description


  • Genus: Ectocarpus
  • Species: species12
  • Strain: Ec fas CH92 Nie 2f
  • Sex: Female
  • Ploidy: Diploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 362.31 Mbp
  • Number of contigs: 90668
  • GC content: 53.4%
  • N content: 0%
  • N50: 9.57 Kbp
  • L50: 10414

Annotation

  • Protein-coding genes: 38530
  • Gene length (average): 3445.15
  • Gene length (median): 2143.0
  • CDS length (average): 924.69
  • CDS length (median): 585.0
  • CDS proportion (genome): 0.091%
  • Genes without introns: 10255
  • Number of contigs with at least one gene (genome): 25.0%
  • Number of contigs with at least one gene (bases): 60.6%

BUSCO results

Genome

  • Single-copy genes: 129
  • Duplicated genes: 48
  • Fragmented genes: 51
  • Missing genes: 75

Proteins

  • Single-copy genes: 165
  • Duplicated genes: 3
  • Fragmented genes: 76
  • Missing genes: 59

Additional genome assemblies for this species