Best Assembly Desmarestia dudresnayi

Draft genome

Description


  • Genus: Desmarestia
  • Species: dudresnayi
  • Strain: DdudBR16
  • Sex: Monoicous
  • Ploidy: Haploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 421.08 Mbp
  • Number of contigs: 90763
  • GC content: 47.9%
  • N content: 0%
  • N50: 9.67 Kbp
  • L50: 12088

Annotation

  • Protein-coding genes: 28809
  • Gene length (average): 2611.85
  • Gene length (median): 1241.0
  • CDS length (average): 816.83
  • CDS length (median): 555.0
  • CDS proportion (genome): 0.053%
  • Genes without introns: 9504
  • Number of contigs with at least one gene (genome): 19.7%
  • Number of contigs with at least one gene (bases): 43.0%

BUSCO results

Genome

  • Single-copy genes: 135
  • Duplicated genes: 65
  • Fragmented genes: 48
  • Missing genes: 55

Proteins

  • Single-copy genes: 156
  • Duplicated genes: 88
  • Fragmented genes: 46
  • Missing genes: 13