Desmarestia dudresnayi (v2 assembly)
Near chromosome scale assembly
Description
- Genus: Desmarestia
- Species: dudresnayi
- Strain: DdudBR16
- Sex: Monoicous
- Ploidy: Haploid
- Common name: No common name known
Resources
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Download Desmarestia dudresnayi archive (Not yet available)
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection ↵
- Publications:
World occurrences (from GBIF)
Assembly
- Version: v2
- Sequencing: Not communicated
- Size: 425.03 Mbp
- Number of contigs: 823
- GC content: 48.8%
- N content: 0%
- N50: 13.23 Mbp
- L50: 14
Annotation
- Protein-coding genes: 32769
- Gene length (average): 7271.31
- Gene length (median): 2569.0
- CDS length (average): 1216.11
- CDS length (median): 913.0
- CDS proportion (genome): 9.5%
- Genes without introns: 11953
- Number of contigs with at least one gene (genome): 73.63%
- Number of contigs with at least one gene (bases): 99.51%
BUSCO results (BUSCO v5 with eukaryota_odb10)
Genome
- Single-copy genes: 194
- Duplicated genes: 12
- Fragmented genes: 25
- Missing genes: 24
Proteins
- Single-copy genes: 199
- Duplicated genes: 19
- Fragmented genes: 21
- Missing genes: 16
Additional genome assemblies for this species
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Desmarestia dudresnayi DdudBR16 Monoicous
Sequencing:
Near chromosome scale assembly