Tribonema minus
Description
- Genus: Tribonema
- Species: minus
- Strain: UTEX B 3156
- Sex: Unknown
- Ploidy: Unknown
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
- Publications:
World occurrences (from GBIF)
Assembly
- Sequencing: PacBio + illumina
- Size: 158.35 Mbp
- Number of contigs: 557
- GC content: 56.9%
- N content: 0%
- N50: 768.63 Kbp
- L50: 66
Annotation
- Protein-coding genes: 18290
- Gene length (average): 5209.34
- Gene length (median): 3241.5
- CDS length (average): 1399.81
- CDS length (median): 1023.0
- CDS proportion (genome): 0.1617%
- Genes without introns: 3277
- Number of contigs with at least one gene (genome): 86.35%
- Number of contigs with at least one gene (bases): 99.03%
BUSCO results
Genome
- Single-copy genes: 235
- Duplicated genes: 7
- Fragmented genes: 12
- Missing genes: 49
Proteins
- Single-copy genes: 257
- Duplicated genes: 13
- Fragmented genes: 13
- Missing genes: 20