Sphacelaria rigidula
(Female)
Draft genome
Description
- Genus: Sphacelaria
- Species: rigidula
- Strain: Sph rig Cal Mo 4-1-68b (KU-MACC1312)
- Sex: Female
- Ploidy: Haploid
- Common name: No common name known
Resources
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina
- Size: 244.23 Mbp
- Number of contigs: 27212
- GC content: 49.8%
- N content: 0%
- N50: 9.02 Kbp
- L50: 9491
Annotation
- Protein-coding genes: 14181
- Gene length (average): 2853.05
- Gene length (median): 1326.0
- CDS length (average): 756.76
- CDS length (median): 450.0
- CDS proportion (genome): 0.044%
- Genes without introns: 5945
- Number of contigs with at least one gene (genome): 40.7%
- Number of contigs with at least one gene (bases): 45.7%
BUSCO results
Genome
- Single-copy genes: 55
- Duplicated genes: 1
- Fragmented genes: 64
- Missing genes: 183
Proteins
- Single-copy genes: 85
- Duplicated genes: 5
- Fragmented genes: 73
- Missing genes: 140