Pelvetia canaliculata
Draft genome
Description
- Genus: Pelvetia
- Species: canaliculata
- Strain: Unknown strain
- Sex: Dioecious
- Ploidy: Diploid
- Common name: Channelled wrack
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
Assembly
- Sequencing: Illumina
- Size: 544.14 Mbp
- Number of contigs: 171596
- GC content: 48.8%
- N content: 0%
- N50: 7.52 Kbp
- L50: 19888
Annotation
- Protein-coding genes: 24108
- Gene length (average): 2557.95
- Gene length (median): 1169.0
- CDS length (average): 992.22
- CDS length (median): 633.0
- CDS proportion (genome): 0.04%
- Genes without introns: 11356
- Number of contigs with at least one gene (genome): 8.8%
- Number of contigs with at least one gene (bases): 24.5%
BUSCO results
Genome
- Single-copy genes: 272
- Duplicated genes: 20
- Fragmented genes: 5
- Missing genes: 6
Proteins
- Single-copy genes: 232
- Duplicated genes: 53
- Fragmented genes: 9
- Missing genes: 9