Best Assembly Chrysoparadoxa australica

Draft genome

Description


  • Genus: Chrysoparadoxa
  • Species: australica
  • Strain: CS-1217
  • Sex: Unknown
  • Ploidy: Unknown
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina
  • Size: 55.92 Mbp
  • Number of contigs: 13584
  • GC content: 51.9%
  • N content: 0%
  • N50: 27.75 Kbp
  • L50: 590

Annotation

  • Protein-coding genes: 18609
  • Gene length (average): 2337.96
  • Gene length (median): 1296.0
  • CDS length (average): 1037.5
  • CDS length (median): 777.0
  • CDS proportion (genome): 0.287%
  • Genes without introns: 7454
  • Number of contigs with at least one gene (genome): 36.4%
  • Number of contigs with at least one gene (bases): 80.2%

BUSCO results

Genome

  • Single-copy genes: 209
  • Duplicated genes: 6
  • Fragmented genes: 24
  • Missing genes: 64

Proteins

  • Single-copy genes: 239
  • Duplicated genes: 8
  • Fragmented genes: 30
  • Missing genes: 26