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Saccorhiza polyschides (Female)

Draft genome

AlgaeBase

Worms

GGA

GGA

ncbi

Description


  • Genus: Saccorhiza
  • Species: polyschides
  • Strain: SpolBR94f
  • Sex: Female
  • Ploidy: Haploid
  • Common name: Furbellow

Resources

Assembly

  • Sequencing: Illumina
  • Size: 498.12 Mbp
  • Number of contigs: 139562
  • GC content: 49.5%
  • N content: 0%
  • N50: 6.93 Kbp
  • L50: 18815

Annotation

  • Protein-coding genes: 20384
  • Gene length (average): 3009.85
  • Gene length (median): 1529.0
  • CDS length (average): 758.15
  • CDS length (median): 444.0
  • CDS proportion (genome): 0.03%
  • Genes without introns: 7487
  • Number of contigs with at least one gene (genome): 11.1%
  • Number of contigs with at least one gene (bases): 26.5%

BUSCO results

Genome

  • Single-copy genes: 91
  • Duplicated genes: 1
  • Fragmented genes: 95
  • Missing genes: 116

Proteins

  • Single-copy genes: 125
  • Duplicated genes: 2
  • Fragmented genes: 115
  • Missing genes: 61

Additional genome assemblies for this species