Ectocarpus subulatus (Male)
Description
- Genus: Ectocarpus
- Species: subulatus
- Strain: Bft15b
- Sex: Male
- Ploidy: Haploid
- Common name: No common name known
Resources
- Genome browser ↵
- Genome database ↵
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
- Other collection ↵
- Publications:
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina MatePE
- Size: 242.4 Mbp
- Number of contigs: 1757
- GC content: 53.6%
- N content: 1113%
- N50: 510.67 Kbp
- L50: 158
Annotation
- Protein-coding genes: 25785
- Gene length (average): 5445.01
- Gene length (median): 3599.0
- CDS length (average): 1341.94
- CDS length (median): 959.5
- CDS proportion (genome): 14.27%
- Genes without introns: 4057
- Number of contigs with at least one gene (genome): 82.18%
- Number of contigs with at least one gene (bases): 99.5%
BUSCO results
Genome
- Single-copy genes: 228
- Duplicated genes: 3
- Fragmented genes: 20
- Missing genes: 52
Proteins
- Single-copy genes: 226
- Duplicated genes: 9
- Fragmented genes: 32
- Missing genes: 36