You are viewing Ectocarpus crouaniorum Ec861f (EcPH12-09f) Female , to access additional genome assemblies for this species, click here

Ectocarpus crouaniorum (Female)

Draft genome

AlgaeBase

Worms

GGA

GGA

ncbi

Description


  • Genus: Ectocarpus
  • Species: crouaniorum
  • Strain: Ec861f (EcPH12-09f)
  • Sex: Female
  • Ploidy: Haploid
  • Common name: No common name known

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Illumina
  • Size: 210.49 Mbp
  • Number of contigs: 26101
  • GC content: 52.1%
  • N content: 0%
  • N50: 18.85 Kbp
  • L50: 2831

Annotation

  • Protein-coding genes: 18132
  • Gene length (average): 4543.82
  • Gene length (median): 3557.0
  • CDS length (average): 1185.65
  • CDS length (median): 816.0
  • CDS proportion (genome): 0.102%
  • Genes without introns: 3463
  • Number of contigs with at least one gene (genome): 36.3%
  • Number of contigs with at least one gene (bases): 67.3%

BUSCO results

Genome

  • Single-copy genes: 180
  • Duplicated genes: 9
  • Fragmented genes: 39
  • Missing genes: 75

Proteins

  • Single-copy genes: 194
  • Duplicated genes: 10
  • Fragmented genes: 53
  • Missing genes: 46

Additional genome assemblies for this species

< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >