Saccharina latissima
(Female)
Good quality assembly
Description
- Genus: Saccharina
- Species: latissima
- Strain: SLPER63f
- Sex: Female
- Ploidy: Haploid
- Common name: No common name known
Resources
World occurrences (from GBIF)
Assembly
- Sequencing: Illumina, PacBio
- Size: 531.27 Mbp
- Number of contigs: 4592
- GC content: 49.7%
- N content: 0%
- N50: 247.17 Kbp
- L50: 632
Annotation
- Protein-coding genes: 17672
- Gene length (average): 10887.64
- Gene length (median): 6706.0
- CDS length (average): 1171.78
- CDS length (median): 777.0
- CDS proportion (genome): 0.039%
- Genes without introns: 3412
- Number of contigs with at least one gene (genome): 59.6%
- Number of contigs with at least one gene (bases): 88.7%
BUSCO results
Genome
- Single-copy genes: 203
- Duplicated genes: 3
- Fragmented genes: 22
- Missing genes: 75
Proteins
- Single-copy genes: 242
- Duplicated genes: 8
- Fragmented genes: 33
- Missing genes: 20