Cladosiphon okamuranus

Description


  • Genus: Cladosiphon
  • Species: okamuranus
  • Strain: S-Strain
  • Sex: Unknown
  • Ploidy: Diploid
  • Common name: mozuku

Resources

Assembly

  • Sequencing: Illumina MatePE
  • Size: 123.9 Mbp
  • Number of contigs: 541
  • GC content: 54.3%
  • N content: Undetermined
  • N50: 406.3 Kbp
  • L50: 91 bp

Annotation

  • Protein-coding genes: 13640
  • Gene length (average): 7433.38
  • Gene length (median): 5816.5
  • CDS length (average): 1993.22
  • CDS length (median): 1388.0
  • CDS proportion (genome): 0.232%
  • Genes without introns: 265
  • Number of contigs with at least one gene (genome): 94.82%
  • Number of contigs with at least one gene (bases): 99.8%

BUSCO results

Genome

  • Single-copy genes: 240
  • Duplicated genes: 2
  • Fragmented genes: 8
  • Missing genes: 53

Proteins

  • Single-copy genes: 222
  • Duplicated genes: 23
  • Fragmented genes: 35
  • Missing genes: 23