Sargassum fusiforme

Description


  • Genus: Sargassum
  • Species: fusiforme
  • Strain: Unknown strain
  • Sex: Unknown
  • Ploidy: Diploid
  • Common name: No common name known

Resources

Assembly

  • Sequencing: Illumina PE, PacBio
  • Size: 376.16 Mbp
  • Number of contigs: 6749
  • GC content: 48.4%
  • N content: 0%
  • N50: 138.75 Kbp
  • L50: 775 bp

Annotation

  • Protein-coding genes: 19404
  • Gene length (average): 5529.76
  • Gene length (median): 3829.0
  • CDS length (average): 1358.69
  • CDS length (median): 978.0
  • CDS proportion (genome): 0.069%
  • Genes without introns: 3048
  • Number of contigs with at least one gene (genome): 46.0%
  • Number of contigs with at least one gene (bases): 80.39%

BUSCO results

Genome

  • Single-copy genes: 218
  • Duplicated genes: 8
  • Fragmented genes: 13
  • Missing genes: 64

Proteins

  • Single-copy genes: 251
  • Duplicated genes: 23
  • Fragmented genes: 19
  • Missing genes: 10