Tribonema minus

Description


  • Genus: Tribonema
  • Species: minus
  • Strain: UTEX B 3156
  • Sex: Unknown
  • Ploidy: Unknown
  • Common name: No common name known

Resources

Assembly

  • Sequencing: PacBio + illumina
  • Size: 151.01 Mbp
  • Number of contigs: 557
  • GC content: 56.9%
  • N content: 0%
  • N50: 750.62 Kbp
  • L50: 66 bp

Annotation

  • Protein-coding genes: 18290
  • Gene length (average): 5209.34
  • Gene length (median): 3241.5
  • CDS length (average): 1399.81
  • CDS length (median): 1023.0
  • CDS proportion (genome): 0.1617%
  • Genes without introns: 3277
  • Number of contigs with at least one gene (genome): 86.35%
  • Number of contigs with at least one gene (bases): 99.03%

BUSCO results

Genome

  • Single-copy genes: 235
  • Duplicated genes: 7
  • Fragmented genes: 12
  • Missing genes: 49

Proteins

  • Single-copy genes: 257
  • Duplicated genes: 13
  • Fragmented genes: 13
  • Missing genes: 20