Phaeoexplorer: summary table

Tables describing the different organisms and their associated data using some common descriptors and metrics.

Genome assemblies
Structural annotations
Structural annotations (BUSCO)
Functionnal annotation (not yet available)

Genome assemblies metrics

Hover over icons to view corresponding captions ( )

Species	Sex	Ploidy	Sequencing	Assembly size	Number of contigs	GC content	N content	N50	L50
Best genome assembly for the species Ascophyllum nodosum Sequencing: Illumina, Nanopore Good quality assembly	Male	Diploid	Illumina, Nanopore	1.25 Gbp	16273	48.3%	0%	230.39 Kbp	1296
Best genome assembly for the species Chordaria linearis Sequencing: Illumina, Nanopore Near chromosome scale assembly	Monoicous	Undetermined	Illumina, Nanopore	214.61 Mbp	217	54.1%	0%	2.25 Mbp	33
Best genome assembly for the species Choristocarpus tenellus Sequencing: Illumina, Nanopore Draft genome	Unknown	Undetermined	Illumina, Nanopore	163.99 Mbp	27308	43.9%	0%	6.78 Kbp	7369
Best genome assembly for the species Chrysoparadoxa australica Sequencing: Illumina Draft genome	Unknown	Undetermined	Illumina	58.64 Mbp	13584	51.9%	0%	28.42 Kbp	590
Cladosiphon okamuranus Sequencing: Illumina MatePE	Unknown	Diploid	Illumina MatePE	129.92 Mbp	541	54.3%	Undetermined	416.06 Kbp	91
Best genome assembly for the species Desmarestia dudresnayi Sequencing: Illumina Draft genome	Monoicous	Haploid	Illumina	441.53 Mbp	90763	47.9%	0%	9.9 Kbp	12088
Desmarestia herbacea Sequencing: Illumina, Nanopore Good quality assembly	Female	Haploid	Illumina, Nanopore	484.71 Mbp	2593	48.4%	0%	559.79 Kbp	249
Best genome assembly for the species Desmarestia herbacea Sequencing: Illumina, Nanopore Good quality assembly	Male	Haploid	Illumina, Nanopore	430.88 Mbp	1483	48.1%	0%	897.97 Kbp	142
Best genome assembly for the species Dictyota dichotoma Sequencing: Illumina, Nanopore Good quality assembly	Male	Haploid	Illumina, Nanopore	851.15 Mbp	6019	50.2%	0%	251.1 Kbp	1009
Best genome assembly for the species Discosporangium mesarthrocarpum Sequencing: Illumina Draft genome	Unknown	Undetermined	Illumina	160.85 Mbp	28369	50.3%	0%	12.57 Kbp	3521
Ectocarpus crouaniorum Sequencing: Illumina Draft genome	Female	Haploid	Illumina	210.49 Mbp	26101	52.1%	0%	18.85 Kbp	2831
Best genome assembly for the species Ectocarpus crouaniorum Sequencing: Illumina, Nanopore Near chromosome scale assembly	Male	Haploid	Illumina, Nanopore	218.47 Mbp	275	53.2%	0%	3.91 Mbp	21
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Female	Haploid	Illumina	165.86 Mbp	35116	53.6%	0%	9.06 Kbp	5030
Best genome assembly for the species Ectocarpus fasciculatus Sequencing: Illumina, Nanopore Good quality assembly	Male	Haploid	Illumina, Nanopore	227.56 Mbp	781	53.4%	0%	671.11 Kbp	94
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Unknown	Diploid	Illumina	232.43 Mbp	46543	52.8%	0%	12.13 Kbp	4574
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Unknown	Diploid	Illumina	196.36 Mbp	42570	53.4%	0%	10.42 Kbp	4979
Ectocarpus siliculosus Sequencing: Illumina Draft genome	Female	Haploid	Illumina	186.48 Mbp	22843	53.7%	0%	26.01 Kbp	2020
Best genome assembly for the species Ectocarpus siliculosus Sequencing: Illumina, Nanopore Good quality assembly	Male	Haploid	Illumina, Nanopore	200.17 Mbp	1633	53.4%	0%	852.57 Kbp	70
Ectocarpus species1 Sequencing: Illumina Draft genome	Female	Haploid	Illumina	186.36 Mbp	19405	52.8%	0%	25.26 Kbp	2096
Best genome assembly for the species Ectocarpus species1 Sequencing: Illumina Draft genome	Male	Haploid	Illumina	188.2 Mbp	23128	53.5%	0%	24.93 Kbp	2129
Ectocarpus species1 Sequencing: Illumina Draft genome	Male	Haploid	Illumina	190.19 Mbp	23044	53.5%	0%	23.74 Kbp	2316
Ectocarpus species12 Sequencing: Illumina Draft genome	Female	Diploid	Illumina	379.91 Mbp	90668	53.4%	0%	9.79 Kbp	10414
Best genome assembly for the species Ectocarpus species12 Sequencing: Illumina Draft genome	Unknown	Diploid	Illumina	375.49 Mbp	85357	53.2%	0%	9.26 Kbp	11090
Best genome assembly for the species Ectocarpus species13 Sequencing: Illumina Draft genome	Unknown	Diploid	Illumina	251.99 Mbp	102324	53.3%	0.16%	5.51 Kbp	11229
Best genome assembly for the species Ectocarpus species2 Sequencing: Illumina Draft genome	Male	Haploid	Illumina	183.42 Mbp	32144	53.3%	0%	12.58 Kbp	4087
Best genome assembly for the species Ectocarpus species3 Sequencing: Illumina Draft genome	Female	Haploid	Illumina	208.94 Mbp	61809	52.9%	0%	7.27 Kbp	7781
Ectocarpus species3 Sequencing: Illumina Draft genome	Male	Haploid	Illumina	225.27 Mbp	73265	53.2%	0%	7.74 Kbp	7651
Best genome assembly for the species Ectocarpus species5 Sequencing: Illumina Draft genome	Female	Haploid	Illumina	176.79 Mbp	28565	53.7%	0%	16.34 Kbp	2994
Ectocarpus species5 Sequencing: Illumina Draft genome	Male	Haploid	Illumina	159.88 Mbp	45536	53.7%	0%	5.53 Kbp	8318
Best genome assembly for the species Ectocarpus species6 Sequencing: Illumina, Nanopore Good quality assembly	Unknown	Diploid	Illumina, Nanopore	214.46 Mbp	434	53.4%	0%	1.35 Mbp	47
Ectocarpus species7 Sequencing: Sanger	Male_plus_femaleSDR	Haploid	Sanger	196.8 Mbp	30	53.5%	0%	6.53 Mbp	12
Best genome assembly for the species Ectocarpus species8 Sequencing: Illumina Draft genome	Unknown	Diploid	Illumina	299.64 Mbp	106905	53.4%	0.26%	5.25 Kbp	15651
Best genome assembly for the species Ectocarpus species9 Sequencing: Illumina Draft genome	Female	Haploid	Illumina	180.19 Mbp	34031	53.7%	0%	13.84 Kbp	3603
Ectocarpus subulatus Sequencing: Illumina MatePE	Male	Haploid	Illumina MatePE	242.4 Mbp	1757	53.6%	1113%	510.67 Kbp	158
Best genome assembly for the species Feldmannia mitchelliae Sequencing: Illumina Draft genome	Monoicous	Haploid	Illumina	205.93 Mbp	27497	52.2%	0%	22.36 Kbp	2457
Best genome assembly for the species Fucus distichus Sequencing: Illumina Draft genome	Monoicous	Diploid	Illumina	724.73 Mbp	228768	47.9%	0%	5.61 Kbp	35389
Best genome assembly for the species Fucus serratus Sequencing: Illumina, Nanopore Good quality assembly	Male	Diploid	Illumina, Nanopore	1.23 Gbp	8882	48.3%	0%	288.97 Kbp	1186
Best genome assembly for the species Halopteris paniculata Sequencing: Illumina Draft genome	Monoicous	Undetermined	Illumina	350.62 Mbp	83026	48.3%	0%	9.52 Kbp	9533
Hapterophycus canaliculatus Sequencing: Illumina Draft genome	Female	Haploid	Illumina	192.78 Mbp	26261	54.7%	0%	16.7 Kbp	3235
Best genome assembly for the species Hapterophycus canaliculatus Sequencing: Illumina Draft genome	Male	Haploid	Illumina	184.05 Mbp	74003	54.6%	0%	3.64 Kbp	14755
Best genome assembly for the species Heribaudiella fluviatilis Sequencing: Illumina Draft genome	Unknown	Undetermined	Illumina	395.97 Mbp	124447	51.5%	0.12%	5.92 Kbp	16125
Best genome assembly for the species Heterosigma akashiwo Sequencing: Illumina, Nanopore Good quality assembly	Unknown	Undetermined	Illumina, Nanopore	1.52 Gbp	4933	47.0%	0%	718.49 Kbp	506
Best genome assembly for the species Himanthalia elongata Sequencing: Illumina Draft genome	Dioecious	Diploid	Illumina	785.46 Mbp	325257	47.3%	0%	3.85 Kbp	55511
Best genome assembly for the species Laminaria digitata Sequencing: Illumina, Nanopore Draft genome	Male	Haploid	Illumina, Nanopore	447.63 Mbp	141688	50.3%	0%	6.23 Kbp	18816
Best genome assembly for the species Laminarionema elsbetiae Sequencing: Illumina Draft genome	Unknown	Haploid	Illumina	237.79 Mbp	37108	52.7%	0%	13.61 Kbp	4881
Macrocystis pyrifera Sequencing: Illumina Draft genome	Male	Haploid	Illumina	459.01 Mbp	128700	50.6%	0%	8.53 Kbp	14039
Best genome assembly for the species Myriotrichia clavaeformis Sequencing: Illumina Draft genome	Female	Haploid	Illumina	144.83 Mbp	18254	54.9%	0%	25.41 Kbp	1623
Myriotrichia clavaeformis Sequencing: Illumina Draft genome	Male	Haploid	Illumina	157.46 Mbp	32431	53.8%	0%	26.02 Kbp	1655
Best genome assembly for the species Pelvetia canaliculata Sequencing: Illumina Draft genome	Dioecious	Diploid	Illumina	570.57 Mbp	171596	48.8%	0%	7.7 Kbp	19888
Best genome assembly for the species Phaeosaccion multiseriatum Sequencing: Illumina, Nanopore, Hi-C Near chromosome scale assembly	Unknown	Undetermined	Illumina, Nanopore, Hi-C	Undetermined	Undetermined	Undetermined	Undetermined	Undetermined	Undetermined
Best genome assembly for the species Phaeothamnion wetherbeei Sequencing: Illumina, Nanopore Draft genome	Unknown	Undetermined	Illumina, Nanopore	78.71 Mbp	42337	61.2%	0%	3.22 Kbp	6824
Best genome assembly for the species Pleurocladia lacustris Sequencing: Illumina, Nanopore Good quality assembly	Unknown	Haploid	Illumina, Nanopore	220.44 Mbp	2680	52.1%	0%	118.92 Kbp	555
Best genome assembly for the species Porterinema fluviatile Sequencing: Illumina, Nanopore Near chromosome scale assembly	Unknown	Undetermined	Illumina, Nanopore	167.19 Mbp	110	54.5%	0%	2.62 Mbp	22
Best genome assembly for the species Pylaiella littoralis Sequencing: Illumina, Nanopore Good quality assembly	Unknown	Haploid	Illumina, Nanopore	322.46 Mbp	1708	51.4%	0%	352.95 Kbp	274
Saccharina japonica Sequencing: Illumina MatePE, PacBio	Unknown	Diploid	Illumina MatePE, PacBio	548.54 Mbp	32	49.6%	0.17%	15.13 Mbp	6
Best genome assembly for the species Saccharina latissima Sequencing: Illumina, PacBio Good quality assembly	Female	Haploid	Illumina, PacBio	531.27 Mbp	4592	49.7%	0%	247.17 Kbp	632
Best genome assembly for the species Saccorhiza dermatodea Sequencing: Illumina Draft genome	Monoicous	Haploid	Illumina	352.01 Mbp	98404	50.6%	0%	6.66 Kbp	13789
Saccorhiza polyschides Sequencing: Illumina Draft genome	Female	Haploid	Illumina	522.31 Mbp	139562	49.5%	0%	7.09 Kbp	18815
Best genome assembly for the species Saccorhiza polyschides Sequencing: Illumina Draft genome	Male	Haploid	Illumina	557.45 Mbp	138132	49.9%	0%	11.64 Kbp	11919
Sargassum fusiforme Sequencing: Illumina PE, PacBio	Unknown	Diploid	Illumina PE, PacBio	394.43 Mbp	6749	48.4%	0%	142.09 Kbp	775
Best genome assembly for the species Schizocladia ischiensis Sequencing: Illumina, Nanopore Near chromosome scale assembly	Unknown	Undetermined	Illumina, Nanopore	194.51 Mbp	130	57.0%	0%	2.52 Mbp	26
Scytosiphon promiscuus Sequencing: Illumina Draft genome	Female	Haploid	Illumina	256.91 Mbp	89860	53.7%	0%	31.14 Kbp	1751
Best genome assembly for the species Scytosiphon promiscuus Sequencing: Illumina, Nanopore Near chromosome scale assembly	Male	Haploid	Illumina, Nanopore	193.2 Mbp	111	54.6%	0%	3.11 Mbp	19
Best genome assembly for the species Sphacelaria rigidula Sequencing: Illumina Draft genome	Female	Haploid	Illumina	244.23 Mbp	27212	49.8%	0%	9.02 Kbp	9491
Best genome assembly for the species Sphaerotrichia firma Sequencing: Illumina Draft genome	Female	Haploid	Illumina	198.78 Mbp	40448	56.1%	0.10%	10.97 Kbp	4592
Sphaerotrichia firma Sequencing: Illumina Draft genome	Male	Haploid	Illumina	153.64 Mbp	29656	55.0%	0%	13.5 Kbp	3113
Tribonema minus Sequencing: PacBio + illumina	Unknown	Undetermined	PacBio + illumina	158.35 Mbp	557	56.9%	0%	768.63 Kbp	66
Undaria pinnatifida Sequencing: Illumina, PacBio, genetic-map-based pseudochromosomes	Unknown	Diploid	Illumina, PacBio, genetic-map-based pseudochromosomes	634.55 Mbp	33	0%	60.1%	16.68 Mbp	8

Structural annotations metrics

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Species	Sex	Protein-coding genes	Exons per gene (mean \| median)	CDS length (mean \| median)	CDS percentage	Monoexonic genes	Contigs with at least one gene (percentage of genome \| percentage of bases)	lncRNAs
Best genome assembly for the species Ascophyllum nodosum Sequencing: Good quality assembly	Male	24121	5.61 \| 3.0	1187.12 \| 684.0	0.023%	5672	33.0% \| 77.2%	Undetermined
Best genome assembly for the species Chordaria linearis Sequencing: Near chromosome scale assembly	Monoicous	17198	7.1 \| 5.0	1520.22 \| 1086.0	0.122%	2795	87.1% \| 99.4%	Undetermined
Best genome assembly for the species Choristocarpus tenellus Sequencing: Draft genome	Unknown	13635	3.47 \| 3.0	744.61 \| 519.0	0.062%	3189	38.1% \| 50.1%	Undetermined
Best genome assembly for the species Chrysoparadoxa australica Sequencing: Illumina Draft genome	Unknown	18609	6.95 \| 4.0	1037.5 \| 777.0	0.287%	7454	36.4% \| 80.2%	Undetermined
Cladosiphon okamuranus Sequencing: Illumina MatePE	Unknown	13640	10.53 \| 8.0	1993.22 \| 1388.0	0.232%	265	94.82% \| 99.8%	Undetermined
Best genome assembly for the species Desmarestia dudresnayi Sequencing: Illumina Draft genome	Monoicous	28809	3.15 \| 2.0	816.83 \| 555.0	0.053%	9504	19.7% \| 43.0%	Undetermined
Desmarestia herbacea Sequencing: Good quality assembly	Female	16759	6.44 \| 4.0	1257.4 \| 879.0	0.043%	3057	49.4% \| 87.6%	Undetermined
Best genome assembly for the species Desmarestia herbacea Sequencing: Good quality assembly	Male	16271	6.84 \| 5.0	1477.44 \| 1122.0	0.05%	2561	54.9% \| 95.1%	Undetermined
Best genome assembly for the species Dictyota dichotoma Sequencing: Good quality assembly	Male	20583	5.57 \| 3.0	1190.84 \| 741.0	0.029%	5188	73.3% \| 91.6%	Undetermined
Best genome assembly for the species Discosporangium mesarthrocarpum Sequencing: Illumina Draft genome	Unknown	26708	3.08 \| 2.0	730.96 \| 525.0	0.119%	11503	52.5% \| 78.3%	Undetermined
Ectocarpus crouaniorum Sequencing: Illumina Draft genome	Female	18132	5.38 \| 4.0	1185.65 \| 816.0	0.102%	3463	36.3% \| 67.3%	Undetermined
Best genome assembly for the species Ectocarpus crouaniorum Sequencing: Near chromosome scale assembly	Male	17770	7.51 \| 6.0	1612.67 \| 1179.0	0.131%	2327	68.0% \| 98.8%	Undetermined
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Female	18167	4.7 \| 3.0	1042.37 \| 693.0	0.113%	3757	33.0% \| 65.0%	Undetermined
Best genome assembly for the species Ectocarpus fasciculatus Sequencing: Good quality assembly	Male	19173	6.18 \| 5.0	1220.93 \| 972.0	0.103%	2822	91.1% \| 98.6%	Undetermined
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Unknown	22946	4.53 \| 3.0	1164.55 \| 831.0	11.2%	5577	23.8% \| 65.6%	Undetermined
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Unknown	17977	5.02 \| 4.0	1107.21 \| 741.0	9.4%	3378	23.8% \| 58.6%	Undetermined
Ectocarpus siliculosus Sequencing: Illumina Draft genome	Female	18119	6.02 \| 4.0	1353.22 \| 936.0	12.8%	3720	29.3% \| 78.2%	Undetermined
Best genome assembly for the species Ectocarpus siliculosus Sequencing: Good quality assembly	Male	17801	7.52 \| 6.0	1631.23 \| 1194.0	0.145%	2466	41.0% \| 96.9%	Undetermined
Ectocarpus species1 Sequencing: Illumina Draft genome	Female	19066	5.71 \| 4.0	1256.42 \| 834.0	10.3%	3883	16.8% \| 66.4%	Undetermined
Best genome assembly for the species Ectocarpus species1 Sequencing: Illumina Draft genome	Male	18068	5.93 \| 4.0	1330.69 \| 924.0	11.6%	3707	19.3% \| 74.2%	Undetermined
Ectocarpus species1 Sequencing: Illumina Draft genome	Male	19620	5.56 \| 4.0	1257.72 \| 825.0	12.9%	4755	35.4% \| 80.4%	Undetermined
Ectocarpus species12 Sequencing: Illumina Draft genome	Female	38530	4.31 \| 3.0	924.69 \| 585.0	0.091%	10255	25.0% \| 60.6%	Undetermined
Best genome assembly for the species Ectocarpus species12 Sequencing: Illumina Draft genome	Unknown	48353	3.44 \| 2.0	835.29 \| 558.0	0.108%	21099	38.6% \| 62.9%	Undetermined
Best genome assembly for the species Ectocarpus species13 Sequencing: Illumina Draft genome	Unknown	21643	4.11 \| 3.0	912.17 \| 567.0	0.077%	5754	15.4% \| 46.0%	Undetermined
Best genome assembly for the species Ectocarpus species2 Sequencing: Illumina Draft genome	Male	16843	5.18 \| 4.0	1144.23 \| 786.0	9.6%	3278	25.8% \| 62.5%	Undetermined
Best genome assembly for the species Ectocarpus species3 Sequencing: Illumina Draft genome	Female	18004	4.93 \| 4.0	1167.22 \| 807.0	0.101%	3598	20.7% \| 55.1%	Undetermined
Ectocarpus species3 Sequencing: Illumina Draft genome	Male	18101	4.69 \| 3.0	1081.61 \| 678.0	8.6%	4436	16.1% \| 52.1%	Undetermined
Best genome assembly for the species Ectocarpus species5 Sequencing: Illumina Draft genome	Female	17193	5.67 \| 4.0	1257.15 \| 873.0	12.1%	2972	31.4% \| 73.7%	Undetermined
Ectocarpus species5 Sequencing: Illumina Draft genome	Male	20082	3.66 \| 3.0	818.83 \| 531.0	0.102%	5505	34.2% \| 56.9%	Undetermined
Best genome assembly for the species Ectocarpus species6 Sequencing: Good quality assembly	Unknown	18873	7.14 \| 5.0	1510.96 \| 1113.0	0.133%	2520	92.9% \| 99.1%	Undetermined
Ectocarpus species7 Sequencing: Sanger	Male_plus_femaleSDR	16709	8.76 \| 7.0	1610.39 \| 1119.0	0.198%	1400	100.0% \| 100.0%	883
Best genome assembly for the species Ectocarpus species8 Sequencing: Illumina Draft genome	Unknown	31882	3.6 \| 2.0	774.98 \| 498.0	0.082%	9141	23.4% \| 49.9%	Undetermined
Best genome assembly for the species Ectocarpus species9 Sequencing: Illumina Draft genome	Female	18057	5.25 \| 4.0	1163.15 \| 762.0	9.8%	3523	21.5% \| 59.9%	Undetermined
Ectocarpus subulatus Sequencing: Illumina MatePE	Male	25785	5.38 \| 4.0	1341.94 \| 959.5	14.27%	4057	82.18% \| 99.5%	Undetermined
Best genome assembly for the species Feldmannia mitchelliae Sequencing: Illumina Draft genome	Monoicous	17647	5.76 \| 4.0	1303.74 \| 867.0	0.112%	3576	30.8% \| 75.6%	Undetermined
Best genome assembly for the species Fucus distichus Sequencing: Illumina Draft genome	Monoicous	19428	3.41 \| 2.0	731.54 \| 483.0	0.02%	6362	7.4% \| 16.2%	Undetermined
Best genome assembly for the species Fucus serratus Sequencing: Good quality assembly	Male	21263	6.07 \| 4.0	1202.77 \| 837.0	0.021%	3795	49.8% \| 79.6%	Undetermined
Best genome assembly for the species Halopteris paniculata Sequencing: Illumina Draft genome	Monoicous	17571	4.41 \| 3.0	997.12 \| 603.0	0.05%	4769	15.5% \| 46.0%	Undetermined
Hapterophycus canaliculatus Sequencing: Illumina Draft genome	Female	20036	5.0 \| 3.0	1101.6 \| 717.0	0.114%	4898	38.4% \| 74.8%	Undetermined
Best genome assembly for the species Hapterophycus canaliculatus Sequencing: Illumina Draft genome	Male	25107	2.83 \| 2.0	571.47 \| 372.0	0.076%	8967	29.3% \| 42.8%	Undetermined
Best genome assembly for the species Heribaudiella fluviatilis Sequencing: Illumina Draft genome	Unknown	41302	4.49 \| 3.0	706.69 \| 480.0	0.073%	8994	23.2% \| 48.0%	Undetermined
Best genome assembly for the species Heterosigma akashiwo Sequencing: Good quality assembly	Unknown	15415	2.99 \| 2.0	633.69 \| 462.0	0.06%	5802	66.8% \| 93.6%	Undetermined
Best genome assembly for the species Himanthalia elongata Sequencing: Illumina Draft genome	Dioecious	17308	3.15 \| 2.0	686.22 \| 432.0	0.015%	6120	4.9% \| 10.3%	Undetermined
Best genome assembly for the species Laminaria digitata Sequencing: Draft genome	Male	42270	2.11 \| 1.0	594.94 \| 423.0	0.055%	27401	21.9% \| 36.9%	Undetermined
Best genome assembly for the species Laminarionema elsbetiae Sequencing: Illumina Draft genome	Unknown	18917	4.68 \| 3.0	1044.26 \| 642.0	7.7%	5108	25.3% \| 59.0%	Undetermined
Macrocystis pyrifera Sequencing: Illumina Draft genome	Male	22998	2.59 \| 1.0	719.41 \| 516.0	0.0035%	13232	15.0% \| 25.0%	Undetermined
Best genome assembly for the species Myriotrichia clavaeformis Sequencing: Illumina Draft genome	Female	21281	5.97 \| 4.0	1305.46 \| 945.0	0.169%	4555	35.3% \| 78.3%	Undetermined
Myriotrichia clavaeformis Sequencing: Illumina Draft genome	Male	25205	5.2 \| 3.0	1177.47 \| 753.0	0.163%	7242	26.9% \| 73.3%	Undetermined
Best genome assembly for the species Pelvetia canaliculata Sequencing: Illumina Draft genome	Dioecious	24108	3.18 \| 2.0	992.22 \| 633.0	0.04%	11356	8.8% \| 24.5%	Undetermined
Best genome assembly for the species Phaeosaccion multiseriatum Sequencing: Near chromosome scale assembly	Unknown	Undetermined	Undetermined	Undetermined	Undetermined	Undetermined	Undetermined	Undetermined
Best genome assembly for the species Phaeothamnion wetherbeei Sequencing: Draft genome	Unknown	26911	1.97 \| 1.0	788.88 \| 606.0	0.224%	17105	34.3% \| 55.7%	Undetermined
Best genome assembly for the species Pleurocladia lacustris Sequencing: Good quality assembly	Unknown	16268	5.82 \| 4.0	1139.9 \| 885.0	0.056%	2726	76.1% \| 64.7%	Undetermined
Best genome assembly for the species Porterinema fluviatile Sequencing: Near chromosome scale assembly	Unknown	15519	7.13 \| 5.0	1492.35 \| 1092.0	0.139%	2449	99.1% \| 100.0%	Undetermined
Best genome assembly for the species Pylaiella littoralis Sequencing: Good quality assembly	Unknown	22501	5.87 \| 3.0	1309.47 \| 798.0	0.091%	5559	89.1% \| 99.2%	Undetermined
Saccharina japonica Sequencing: Illumina MatePE, PacBio	Unknown	18732	6.49 \| 5.0	1657.5 \| 1252.0	0.056%	2802	100.0% \| 100.0%	Undetermined
Best genome assembly for the species Saccharina latissima Sequencing: Illumina, PacBio Good quality assembly	Female	17672	5.92 \| 4.0	1171.78 \| 777.0	0.039%	3412	59.6% \| 88.7%	Undetermined
Best genome assembly for the species Saccorhiza dermatodea Sequencing: Illumina Draft genome	Monoicous	17913	3.55 \| 2.0	758.97 \| 429.0	0.039%	6274	14.1% \| 33.9%	Undetermined
Saccorhiza polyschides Sequencing: Illumina Draft genome	Female	20384	3.42 \| 2.0	758.15 \| 444.0	0.03%	7487	11.1% \| 26.5%	Undetermined
Best genome assembly for the species Saccorhiza polyschides Sequencing: Illumina Draft genome	Male	19747	3.75 \| 2.0	816.07 \| 489.0	0.029%	6768	9.8% \| 32.8%	Undetermined
Sargassum fusiforme Sequencing: Illumina PE, PacBio	Unknown	19404	6.81 \| 5.0	1358.69 \| 978.0	0.069%	3048	46.0% \| 80.39%	Undetermined
Best genome assembly for the species Schizocladia ischiensis Sequencing: Near chromosome scale assembly	Unknown	21187	4.7 \| 3.0	857.41 \| 615.0	0.093%	4473	99.2% \| 100.0%	Undetermined
Scytosiphon promiscuus Sequencing: Illumina Draft genome	Female	30281	4.49 \| 2.0	970.69 \| 591.0	0.113%	13397	16.0% \| 65.9%	Undetermined
Best genome assembly for the species Scytosiphon promiscuus Sequencing: Near chromosome scale assembly	Male	19218	7.16 \| 5.0	1536.8 \| 1101.0	0.113%	3126	100.0% \| 100.0%	Undetermined
Best genome assembly for the species Sphacelaria rigidula Sequencing: Illumina Draft genome	Female	14181	2.9 \| 2.0	756.76 \| 450.0	0.044%	5945	40.7% \| 45.7%	Undetermined
Best genome assembly for the species Sphaerotrichia firma Sequencing: Illumina Draft genome	Female	27957	4.68 \| 3.0	1123.65 \| 768.0	0.156%	6738	35.8% \| 72.6%	Undetermined
Sphaerotrichia firma Sequencing: Illumina Draft genome	Male	20973	5.35 \| 4.0	1174.24 \| 786.0	0.16%	4598	35.5% \| 77.5%	Undetermined
Tribonema minus Sequencing: PacBio + illumina	Unknown	18290	5.93 \| 4.0	1399.81 \| 1023.0	0.1617%	3277	86.35% \| 99.03%	Undetermined
Undaria pinnatifida Sequencing: Illumina, PacBio, genetic-map-based pseudochromosomes	Unknown	20716	6.82 \| 5.0	1343.43 \| 998.5	0.0438%	281	93.93% \| 99.97%	Undetermined

BUSCO metrics

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Species	Sex	Single copy genes (genome)	Duplicated genes (genome)	Fragmented genes (genome)	Missing genes (genomes)	Single copy genes (proteome)	Duplicated genes (proteome)	Fragmented genes (proteome)	Missing genes (proteome)
Best genome assembly for the species Ascophyllum nodosum Sequencing: Good quality assembly	Male	224	8	9	62	258	10	17	18
Best genome assembly for the species Chordaria linearis Sequencing: Near chromosome scale assembly	Monoicous	237	4	15	47	275	4	13	11
Best genome assembly for the species Choristocarpus tenellus Sequencing: Draft genome	Undetermined	94	1	71	137	124	7	94	78
Best genome assembly for the species Chrysoparadoxa australica Sequencing: Illumina Draft genome	Undetermined	209	6	24	64	239	8	30	26
Cladosiphon okamuranus Sequencing: Illumina MatePE	Undetermined	240	2	8	53	222	23	35	23
Best genome assembly for the species Desmarestia dudresnayi Sequencing: Illumina Draft genome	Monoicous	135	65	48	55	156	88	46	13
Desmarestia herbacea Sequencing: Good quality assembly	Female	218	4	19	62	267	12	15	9
Best genome assembly for the species Desmarestia herbacea Sequencing: Good quality assembly	Male	216	3	20	64	269	8	18	8
Best genome assembly for the species Dictyota dichotoma Sequencing: Good quality assembly	Male	212	3	19	69	252	9	14	28
Best genome assembly for the species Discosporangium mesarthrocarpum Sequencing: Illumina Draft genome	Undetermined	136	8	63	96	165	16	89	33
Ectocarpus crouaniorum Sequencing: Illumina Draft genome	Female	180	9	39	75	194	10	53	46
Best genome assembly for the species Ectocarpus crouaniorum Sequencing: Near chromosome scale assembly	Male	230	5	13	55	273	7	14	9
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Female	142	1	86	74	163	2	91	47
Best genome assembly for the species Ectocarpus fasciculatus Sequencing: Good quality assembly	Male	231	2	17	53	234	7	39	23
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Undetermined	221	38	15	29	184	77	24	18
Ectocarpus fasciculatus Sequencing: Illumina Draft genome	Undetermined	173	3	67	60	189	6	72	36
Ectocarpus siliculosus Sequencing: Illumina Draft genome	Female	197	4	39	63	225	6	33	39
Best genome assembly for the species Ectocarpus siliculosus Sequencing: Good quality assembly	Male	233	4	15	51	278	7	10	8
Ectocarpus species1 Sequencing: Illumina Draft genome	Female	202	2	38	61	222	5	38	38
Best genome assembly for the species Ectocarpus species1 Sequencing: Illumina Draft genome	Male	197	7	38	61	221	5	37	40
Ectocarpus species1 Sequencing: Illumina Draft genome	Male	195	4	47	57	212	7	47	37
Ectocarpus species12 Sequencing: Illumina Draft genome	Female	129	48	51	75	165	3	76	59
Best genome assembly for the species Ectocarpus species12 Sequencing: Illumina Draft genome	Undetermined	126	33	59	85	156	69	61	17
Best genome assembly for the species Ectocarpus species13 Sequencing: Illumina Draft genome	Undetermined	150	2	75	76	165	3	76	59
Best genome assembly for the species Ectocarpus species2 Sequencing: Illumina Draft genome	Male	172	9	50	72	194	5	65	39
Best genome assembly for the species Ectocarpus species3 Sequencing: Illumina Draft genome	Female	143	3	59	98	185	8	66	44
Ectocarpus species3 Sequencing: Illumina Draft genome	Male	162	4	65	72	177	5	73	48
Best genome assembly for the species Ectocarpus species5 Sequencing: Illumina Draft genome	Female	195	0	46	62	218	4	49	32
Ectocarpus species5 Sequencing: Illumina Draft genome	Male	114	1	106	82	136	3	101	63
Best genome assembly for the species Ectocarpus species6 Sequencing: Good quality assembly	Undetermined	221	14	12	56	258	18	14	13
Ectocarpus species7 Sequencing: Sanger	Male_plus_femaleSDR	231	2	22	48	249	29	11	14
Best genome assembly for the species Ectocarpus species8 Sequencing: Illumina Draft genome	Undetermined	99	24	94	86	146	29	107	21
Best genome assembly for the species Ectocarpus species9 Sequencing: Illumina Draft genome	Female	170	2	65	66	195	5	53	50
Ectocarpus subulatus Sequencing: Illumina MatePE	Male	228	3	20	52	226	9	32	36
Best genome assembly for the species Feldmannia mitchelliae Sequencing: Illumina Draft genome	Monoicous	185	3	48	67	223	10	46	24
Best genome assembly for the species Fucus distichus Sequencing: Illumina Draft genome	Monoicous	110	2	85	106	144	5	109	45
Best genome assembly for the species Fucus serratus Sequencing: Good quality assembly	Male	221	16	10	66	257	16	15	15
Best genome assembly for the species Halopteris paniculata Sequencing: Illumina Draft genome	Monoicous	144	2	76	81	167	7	79	50
Hapterophycus canaliculatus Sequencing: Illumina Draft genome	Female	186	1	52	64	214	6	57	26
Best genome assembly for the species Hapterophycus canaliculatus Sequencing: Illumina Draft genome	Male	64	0	122	117	117	1	147	38
Best genome assembly for the species Heribaudiella fluviatilis Sequencing: Illumina Draft genome	Undetermined	109	5	58	131	186	63	44	10
Best genome assembly for the species Heterosigma akashiwo Sequencing: Good quality assembly	Undetermined	135	30	25	113	110	16	66	111
Best genome assembly for the species Himanthalia elongata Sequencing: Illumina Draft genome	Dioecious	83	2	99	119	116	3	127	57
Best genome assembly for the species Laminaria digitata Sequencing: Draft genome	Male	101	4	95	103	121	11	119	52
Best genome assembly for the species Laminarionema elsbetiae Sequencing: Illumina Draft genome	Undetermined	152	0	77	74	158	6	81	58
Macrocystis pyrifera Sequencing: Illumina Draft genome	Male	114	4	89	96	150	15	102	36
Best genome assembly for the species Myriotrichia clavaeformis Sequencing: Illumina Draft genome	Female	221	5	22	55	252	8	26	17
Myriotrichia clavaeformis Sequencing: Illumina Draft genome	Male	192	7	29	75	231	22	38	12
Best genome assembly for the species Pelvetia canaliculata Sequencing: Illumina Draft genome	Dioecious	272	20	5	6	232	53	9	9
Best genome assembly for the species Phaeosaccion multiseriatum Sequencing: Near chromosome scale assembly	Undetermined	250	3	13	37	Undetermined	Undetermined	Undetermined	Undetermined
Best genome assembly for the species Phaeothamnion wetherbeei Sequencing: Draft genome	Undetermined	194	7	52	50	208	10	62	23
Best genome assembly for the species Pleurocladia lacustris Sequencing: Good quality assembly	Undetermined	204	4	27	68	216	8	52	27
Best genome assembly for the species Porterinema fluviatile Sequencing: Near chromosome scale assembly	Undetermined	226	3	24	50	266	4	21	12
Best genome assembly for the species Pylaiella littoralis Sequencing: Good quality assembly	Undetermined	218	4	17	64	276	3	9	15
Saccharina japonica Sequencing: Illumina MatePE, PacBio	Undetermined	210	3	23	67	237	8	29	29
Best genome assembly for the species Saccharina latissima Sequencing: Illumina, PacBio Good quality assembly	Female	203	3	22	75	242	8	33	20
Best genome assembly for the species Saccorhiza dermatodea Sequencing: Illumina Draft genome	Monoicous	98	0	94	111	111	1	117	74
Saccorhiza polyschides Sequencing: Illumina Draft genome	Female	91	1	95	116	125	2	115	61
Best genome assembly for the species Saccorhiza polyschides Sequencing: Illumina Draft genome	Male	118	2	90	93	155	6	87	55
Sargassum fusiforme Sequencing: Illumina PE, PacBio	Undetermined	218	8	13	64	251	23	19	10
Best genome assembly for the species Schizocladia ischiensis Sequencing: Near chromosome scale assembly	Undetermined	220	4	33	46	223	16	36	28
Scytosiphon promiscuus Sequencing: Illumina Draft genome	Female	227	2	23	51	247	8	32	16
Best genome assembly for the species Scytosiphon promiscuus Sequencing: Near chromosome scale assembly	Male	241	4	12	46	280	5	8	10
Best genome assembly for the species Sphacelaria rigidula Sequencing: Illumina Draft genome	Female	55	1	64	183	85	5	73	140
Best genome assembly for the species Sphaerotrichia firma Sequencing: Illumina Draft genome	Female	216	24	32	31	187	78	30	8
Sphaerotrichia firma Sequencing: Illumina Draft genome	Male	193	1	53	56	221	7	57	18
Tribonema minus Sequencing: PacBio + illumina	Undetermined	235	7	12	49	257	13	13	20
Undaria pinnatifida Sequencing: Illumina, PacBio, genetic-map-based pseudochromosomes	Undetermined	220	0	12	71	239	8	23	33